RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 MYPNQ86TC9 1320 aa6.7□□□□□ -1.34
VPS8-224ENST00000488255 MAFGO15525 162 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 DAPK3O43293 454 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 SLC26A4O43511 780 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 KDM1AO60341 852 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 OPHN1O60890 802 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 TCIRG1Q13488 830 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 DHCR24Q15392 516 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 HS1BP3Q53T59 392 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 KRT40Q6A162 431 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 GPR135Q8IZ08 494 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 HIST1H2AHQ96KK5 128 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 HIST1H2AJQ99878 128 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 IFT22Q9H7X7 185 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 NCDNQ9UBB6 729 aa6.69□□□□□ -1.34
VPS8-224ENST00000488255 A0A0A6YYJ9 748 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 A0A1W2PRX2 142 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 PRSS38A1L453 326 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 BPIP17213 487 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 MSX2P35548 267 aaPredicted RBP6.68□□□□□ -1.34
VPS8-224ENST00000488255 PHC1P78364 1004 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 RIN1Q13671 783 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 PUM1Q14671 1186 aaKnown RBP eCLIP6.68□□□□□ -1.34
VPS8-224ENST00000488255 GPR158Q5T848 1215 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 FRMD7Q6ZUT3 714 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 CXorf67Q86X51 503 aaPredicted RBP6.68□□□□□ -1.34
VPS8-224ENST00000488255 NKD2Q969F2 451 aaPredicted RBP6.68□□□□□ -1.34
VPS8-224ENST00000488255 SLC7A6OSQ96CW6 309 aaPredicted RBP6.68□□□□□ -1.34
VPS8-224ENST00000488255 ADOQ96SZ5 270 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
VPS8-224ENST00000488255 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
VPS8-224ENST00000488255 AGO3Q9H9G7 860 aaKnown RBP6.68□□□□□ -1.34
VPS8-224ENST00000488255 USP36Q9P275 1121 aaKnown RBP6.68□□□□□ -1.34
VPS8-224ENST00000488255 RAD17O75943 681 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 COMTP21964 271 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 SELENOPP49908 381 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 SAFB2Q14151 953 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS8-224ENST00000488255 GRM7Q14831 915 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 CCDC62Q6P9F0 684 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 PLA2G15Q8NCC3 412 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 UIMC1Q96RL1 719 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 SLC6A15Q9H2J7 730 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 PLA2G3Q9NZ20 509 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 KCNG1Q9UIX4 513 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 PCDHB6Q9Y5E3 794 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 PPP2R3BQ9Y5P8 575 aa6.67□□□□□ -1.34
VPS8-224ENST00000488255 A0A0A6YYK5 440 aaPredicted RBP6.66□□□□□ -1.34
VPS8-224ENST00000488255 MUSKO15146 869 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 ZEB2O60315 1214 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 TOX4O94842 621 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 ACO1P21399 889 aaKnown RBP6.66□□□□□ -1.34
VPS8-224ENST00000488255 RPS19P39019 145 aaKnown RBP6.66□□□□□ -1.34
VPS8-224ENST00000488255 ADCY7P51828 1080 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 FOXL1Q12952 345 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 DUSP8Q13202 625 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 CT83Q5H943 113 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 GGNQ86UU5 652 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 SH3RF3Q8TEJ3 882 aaPredicted RBP6.66□□□□□ -1.34
VPS8-224ENST00000488255 LPPQ93052 612 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 SOX7Q9BT81 388 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 RCAN3Q9UKA8 241 aa6.66□□□□□ -1.34
VPS8-224ENST00000488255 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.65□□□□□ -1.34
VPS8-224ENST00000488255 LPLP06858 475 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 MANFP55145 182 aaKnown RBP6.65□□□□□ -1.34
VPS8-224ENST00000488255 TMPRSS15P98073 1019 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 PPARAQ07869 468 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 ZXDCQ2QGD7 858 aaPredicted RBP6.65□□□□□ -1.34
VPS8-224ENST00000488255 EGFLAMQ63HQ2 1017 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 GAREM2Q75VX8 874 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 POLNQ7Z5Q5 900 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 SPRED1Q7Z699 444 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 SGMS1Q86VZ5 419 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 RASSF3Q86WH2 238 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 D2HGDHQ8N465 521 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 CDYL2Q8N8U2 506 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 CLRN3Q8NCR9 226 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 GAB3Q8WWW8 586 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 RABGGTAQ92696 567 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 CDK5RAP1Q96SZ6 601 aaKnown RBP6.65□□□□□ -1.34
VPS8-224ENST00000488255 GPHA2Q96T91 129 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 TOPORSQ9NS56 1045 aaPredicted RBP6.65□□□□□ -1.34
VPS8-224ENST00000488255 EDARQ9UNE0 448 aa6.65□□□□□ -1.34
VPS8-224ENST00000488255 UBE2QL1A1L167 161 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 FSBPO95073 299 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 PFKMP08237 780 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 XPAP23025 273 aaPredicted RBP6.64□□□□□ -1.35
VPS8-224ENST00000488255 CD69Q07108 199 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 PDCD1Q15116 288 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 CDSNQ15517 529 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 SPDYAQ5MJ70 313 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 IQSEC1Q6DN90 963 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 ZNF808Q8N4W9 903 aaPredicted RBP6.64□□□□□ -1.35
VPS8-224ENST00000488255 C1QTNF3Q9BXJ4 246 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 HAPLN2Q9GZV7 340 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 NELFAQ9H3P2 528 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 PRDM12Q9H4Q4 367 aa6.64□□□□□ -1.35
VPS8-224ENST00000488255 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS8-224ENST00000488255 JAG2Q9Y219 1238 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms