RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 THSD7BQ9C0I4 1608 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 DICER1Q9UPY3 1922 aaKnown RBP6.6□□□□□ -1.35
BRCA1-217ENST00000487825 ITGB4P16144 1822 aa6.6□□□□□ -1.35
BRCA1-217ENST00000487825 ANKRD36BQ8N2N9 1353 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 ZNF536O15090 1300 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 FAM221BA6H8Z2 402 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 CKMP06732 381 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 FAHP16930 419 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
BRCA1-217ENST00000487825 PAK1Q13153 545 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 PAN2Q504Q3 1202 aaKnown RBP6.59□□□□□ -1.35
BRCA1-217ENST00000487825 HABP4Q5JVS0 413 aaKnown RBP6.59□□□□□ -1.35
BRCA1-217ENST00000487825 PTPRN2Q92932 1015 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 EXOC2Q96KP1 924 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 CD244Q9BZW8 370 aa6.59□□□□□ -1.35
BRCA1-217ENST00000487825 MAP2P11137 1827 aaKnown RBP6.59□□□□□ -1.35
BRCA1-217ENST00000487825 AQP7O14520 342 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 CYP7B1O75881 506 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 ITGB3P05106 788 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 C6orf222P0C671 652 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-217ENST00000487825 GLRBP48167 497 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 LBX1P52954 281 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 GUCY1A3Q02108 690 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 SERINC3Q13530 473 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 SPATS1Q496A3 300 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 TBC1D10BQ4KMP7 808 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-217ENST00000487825 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 KCTD1Q719H9 257 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 MAMDC2Q7Z304 686 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-217ENST00000487825 ARHGEF25Q86VW2 580 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 DTX3Q8N9I9 347 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 YTHDC1Q96MU7 727 aaKnown RBP6.58□□□□□ -1.36
BRCA1-217ENST00000487825 DEPDC7Q96QD5 511 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 WRNIP1Q96S55 665 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 CATSPERZQ9NTU4 200 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 HSPBP1Q9NZL4 362 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 FTSJ1Q9UET6 329 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 CCNL1Q9UK58 526 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-217ENST00000487825 C4AP0C0L4 1744 aa6.58□□□□□ -1.36
BRCA1-217ENST00000487825 CNTNAP1P78357 1384 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 RGPD2P0DJD1 1756 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 TCRBV5S4A2TA0A5A2 114 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 C9orf118A6NHY6 69 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 B4GALT3O60512 393 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 SRGAP2CP0DJJ0 459 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 IL2RBP14784 551 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 NFKB2Q00653 900 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 RASA3Q14644 834 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 HHIPL2Q6UWX4 724 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 SH3RF2Q8TEC5 729 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 DLL4Q9NR61 685 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 ZDHHC9Q9Y397 364 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 PCDHA9Q9Y5H5 950 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 DLEC1Q9Y238 1755 aa6.57□□□□□ -1.36
BRCA1-217ENST00000487825 ACOT7O00154 380 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 FBXO21O94952 628 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 PLATP00750 562 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 ADRB1P08588 477 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 HSPA8P11142 646 aaKnown RBP6.56□□□□□ -1.36
BRCA1-217ENST00000487825 PFKPQ01813 784 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 RBL2Q08999 1139 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 SKIDA1Q1XH10 827 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 CD276Q5ZPR3 534 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 ARHGAP36Q6ZRI8 547 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 PCDH19Q8TAB3 1148 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 RBM15Q96T37 977 aaKnown RBP eCLIP6.56□□□□□ -1.36
BRCA1-217ENST00000487825 DHRS4Q9BTZ2 278 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 SNTG2Q9NY99 539 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 ZFP69BQ9UJL9 534 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 MRPS23Q9Y3D9 190 aaKnown RBP6.56□□□□□ -1.36
BRCA1-217ENST00000487825 KDM6AO15550 1401 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-217ENST00000487825 NSD3Q9BZ95 1437 aa6.56□□□□□ -1.36
BRCA1-217ENST00000487825 CASP8AP2Q9UKL3 1982 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 ENO2P09104 434 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-217ENST00000487825 PYGMP11217 842 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 COL6A1P12109 1028 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 KRT15P19012 456 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 EPHA5P54756 1037 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 TGFB2P61812 414 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 GABREP78334 506 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 BTBD8Q5XKL5 378 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 LIMS2Q7Z4I7 341 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 OSTM1Q86WC4 334 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 KBTBD2Q8IY47 623 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 STPG3Q8N7X2 389 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 NUDT10Q8NFP7 164 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 FBXW5Q969U6 566 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 ARMC5Q96C12 935 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 MBD6Q96DN6 1003 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
BRCA1-217ENST00000487825 DNAJC7Q99615 494 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 CDK19Q9BWU1 502 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 ARHGAP20Q9P2F6 1191 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 MON2Q7Z3U7 1717 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 USP47Q96K76 1375 aa6.55□□□□□ -1.36
BRCA1-217ENST00000487825 LTBP1Q14766 1721 aa6.54□□□□□ -1.36
BRCA1-217ENST00000487825 CRTAMO95727 393 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms