RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SPOUT1Q5T280 376 aaKnown RBP22.78■■□□□ 1.24
HDAC4-209ENST00000487617 CATSPER4Q7RTX7 472 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 RNF169Q8NCN4 708 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 ERMNQ8TAM6 284 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 SYMPKQ92797 1274 aaKnown RBP22.78■■□□□ 1.24
HDAC4-209ENST00000487617 HLA-CQ95604 372 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 BACH2Q9BYV9 841 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 IFT122Q9HBG6 1241 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 TUFT1Q9NNX1 390 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 CHST12Q9NRB3 414 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 COG5Q9UP83 839 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.78■■□□□ 1.24
HDAC4-209ENST00000487617 UNC80Q8N2C7 3258 aa22.78■■□□□ 1.24
HDAC4-209ENST00000487617 H3BQV1 296 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 ASAP2O43150 1006 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 HOXA2O43364 376 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 MED24O75448 989 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 DGAT1O75907 488 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 RARRES1P49788 294 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 FERMT3Q86UX7 667 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 CATSPER3Q86XQ3 398 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 C4orf32Q8N8J7 132 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 POLR3CQ9BUI4 534 aaPredicted RBP22.77■■□□□ 1.24
HDAC4-209ENST00000487617 LMAN2LQ9H0V9 348 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 XPNPEP1Q9NQW7 623 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 PIN4Q9Y237 131 aaKnown RBP22.77■■□□□ 1.24
HDAC4-209ENST00000487617 PCDHB6Q9Y5E3 794 aa22.77■■□□□ 1.24
HDAC4-209ENST00000487617 TRANK1O15050 2925 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 A0A0U1RQF3 1178 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 XRCC6P12956 609 aaKnown RBP eCLIP22.76■■□□□ 1.23
HDAC4-209ENST00000487617 AAK1Q2M2I8 961 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 NAALADL2Q58DX5 795 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 TWF2Q6IBS0 349 aaKnown RBP22.76■■□□□ 1.23
HDAC4-209ENST00000487617 SRGAP1Q7Z6B7 1085 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 ABI1Q8IZP0 508 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 RNF149Q8NC42 400 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 P2RX5Q93086 422 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 TMEM117Q9H0C3 514 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 ALG13Q9NP73 1137 aaKnown RBP22.76■■□□□ 1.23
HDAC4-209ENST00000487617 PLAGL2Q9UPG8 496 aa22.76■■□□□ 1.23
HDAC4-209ENST00000487617 RALGAPA2Q2PPJ7 1873 aa22.75■■□□□ 1.23
HDAC4-209ENST00000487617 PTGDRQ13258 359 aa22.75■■□□□ 1.23
HDAC4-209ENST00000487617 MXD4Q14582 209 aaPredicted RBP22.75■■□□□ 1.23
HDAC4-209ENST00000487617 KLHL23Q8NBE8 558 aa22.75■■□□□ 1.23
HDAC4-209ENST00000487617 NACC1Q96RE7 527 aa22.75■■□□□ 1.23
HDAC4-209ENST00000487617 NSUN3Q9H649 340 aaKnown RBP22.75■■□□□ 1.23
HDAC4-209ENST00000487617 AAASQ9NRG9 546 aa22.75■■□□□ 1.23
HDAC4-209ENST00000487617 RNF19AQ9NV58 838 aa22.75■■□□□ 1.23
HDAC4-209ENST00000487617 TYW1Q9NV66 732 aaKnown RBP22.75■■□□□ 1.23
HDAC4-209ENST00000487617 NLRC5Q86WI3 1866 aa22.75■■□□□ 1.23
HDAC4-209ENST00000487617 A0A0C4DFX4 3053 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 USO1O60763 962 aaKnown RBP22.74■■□□□ 1.23
HDAC4-209ENST00000487617 CSPG5O95196 566 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 EOMESO95936 686 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 ITGB1P05556 798 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 RPA1P27694 616 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 PHKA2P46019 1235 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 FXR2P51116 673 aaKnown RBP eCLIP22.74■■□□□ 1.23
HDAC4-209ENST00000487617 TCEAL5Q5H9L2 206 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 POTEGQ6S5H5 508 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 CASD1Q96PB1 797 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 MINDY3Q9H8M7 445 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 HCSTQ9UBK5 93 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 PCDHB12Q9Y5F1 795 aa22.74■■□□□ 1.23
HDAC4-209ENST00000487617 ATF7P17544 494 aaPredicted RBP22.73■■□□□ 1.23
HDAC4-209ENST00000487617 TFDP1Q14186 410 aa22.73■■□□□ 1.23
HDAC4-209ENST00000487617 HAUS3Q68CZ6 603 aa22.73■■□□□ 1.23
HDAC4-209ENST00000487617 ZNF598Q86UK7 904 aaKnown RBP22.73■■□□□ 1.23
HDAC4-209ENST00000487617 ASAP3Q8TDY4 903 aa22.73■■□□□ 1.23
HDAC4-209ENST00000487617 TRAIPQ9BWF2 469 aa22.73■■□□□ 1.23
HDAC4-209ENST00000487617 AGPAT5Q9NUQ2 364 aa22.73■■□□□ 1.23
HDAC4-209ENST00000487617 LRWD1Q9UFC0 647 aa22.73■■□□□ 1.23
HDAC4-209ENST00000487617 DBR1Q9UK59 544 aaKnown RBP22.73■■□□□ 1.23
HDAC4-209ENST00000487617 SKIP12755 728 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 ARL2P36404 184 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 CCT6AP40227 531 aaKnown RBP22.72■■□□□ 1.23
HDAC4-209ENST00000487617 KCNQ1P51787 676 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 RILPL1Q5EBL4 403 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 CLLU1OSQ5K130 101 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 LARP1BQ659C4 914 aaKnown RBP22.72■■□□□ 1.23
HDAC4-209ENST00000487617 MAEAQ7L5Y9 396 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 LRRC43Q8N309 656 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 COLGALT1Q8NBJ5 622 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 SPPL3Q8TCT6 385 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 RAB34Q9BZG1 259 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 POLR3FQ9H1D9 316 aaPredicted RBP22.72■■□□□ 1.23
HDAC4-209ENST00000487617 CWH43Q9H720 699 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 UBE2ZQ9H832 354 aaPredicted RBP22.72■■□□□ 1.23
HDAC4-209ENST00000487617 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.72■■□□□ 1.23
HDAC4-209ENST00000487617 FAM105AQ9NUU6 356 aa22.72■■□□□ 1.23
HDAC4-209ENST00000487617 LAD1O00515 517 aa22.71■■□□□ 1.23
HDAC4-209ENST00000487617 LAG3P18627 525 aa22.71■■□□□ 1.23
HDAC4-209ENST00000487617 RAB27AP51159 221 aa22.71■■□□□ 1.23
HDAC4-209ENST00000487617 PTENP60484 403 aa22.71■■□□□ 1.23
HDAC4-209ENST00000487617 PDIA5Q14554 519 aa22.71■■□□□ 1.23
HDAC4-209ENST00000487617 LRRC55Q6ZSA7 311 aa22.71■■□□□ 1.23
HDAC4-209ENST00000487617 HELQQ8TDG4 1101 aa22.71■■□□□ 1.23
HDAC4-209ENST00000487617 ARHGEF35A5YM69 484 aa22.7■■□□□ 1.22
HDAC4-209ENST00000487617 ERLIN2O94905 339 aa22.7■■□□□ 1.22
HDAC4-209ENST00000487617 MUTP22033 750 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms