RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 PALD1Q9ULE6 856 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 PCDHB14Q9Y5E9 798 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 ROBO3Q96MS0 1386 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 PNMA6EA0A0J9YXQ4 647 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 SLC22A31A6NKX4 558 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 H3BS24 57 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 SEPT4O43236 478 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 ATE1O95260 518 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 RECKO95980 971 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 GH2P01242 217 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 GNAI2P04899 355 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 HLA-DOAP06340 250 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 VCAM1P19320 739 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 VAMP1P23763 118 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 RTP1P59025 263 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 GABPAQ06546 454 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 G3BP1Q13283 466 aaKnown RBP eCLIP6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 ZNF394Q53GI3 561 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 TNNI3KQ59H18 835 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 CCDC158Q5M9N0 1113 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 SLC39A5Q6ZMH5 540 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 MAPKAPK5Q8IW41 473 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 MB21D1Q8N884 522 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 TRPV1Q8NER1 839 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 NPLOC4Q8TAT6 608 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 BAHD1Q8TBE0 780 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 SSH3Q8TE77 659 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 TMEM40Q8WWA1 233 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 EAF1Q96JC9 268 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 CDX2Q99626 313 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 PAGR1Q9BTK6 254 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 NT5C1AQ9BXI3 368 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 ATP13A1Q9HD20 1204 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 METTL5Q9NRN9 209 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 HOXC10Q9NYD6 342 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 BTBD7Q9P203 1132 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 NOP58Q9Y2X3 529 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 FPGT-TNNI3KV9GXZ4 949 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 A0A0G2JMZ2 1700 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 NCOR1O75376 2440 aa6.18□□□□□ -1.42
R3HDM1-218ENST00000487294 IPO8O15397 1037 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 TRIM27P14373 513 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 CYP2C19P33261 490 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 GUCY1A2P33402 732 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 SHMT1P34896 483 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 ZP2Q05996 745 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 COG2Q14746 738 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 SHHQ15465 462 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 SEZ6Q53EL9 994 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 TTC6Q86TZ1 520 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 LRRN4CLQ8ND94 238 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 RGS22Q8NE09 1264 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 MAFAQ8NHW3 353 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 UBE2FQ969M7 185 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 CCDC74BQ96LY2 380 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 SPON2Q9BUD6 331 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 MOV10L1Q9BXT6 1211 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 TTYH1Q9H313 450 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 MROH8Q9H579 483 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 EHMT1Q9H9B1 1298 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 ADAMTS5Q9UNA0 930 aa6.17□□□□□ -1.42
R3HDM1-218ENST00000487294 MYO5AQ9Y4I1 1855 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 WASH4PA8MWX3 477 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 KIAA0355O15063 1070 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 LRRN2O75325 713 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 ADORA2AP29274 412 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 CLCQ05315 142 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 APOBRQ0VD83 1088 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 ABCB5Q2M3G0 1257 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 CERKLQ49MI3 558 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 FBLN7Q53RD9 439 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 TTC39AQ5SRH9 613 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 C9orf50Q5SZB4 431 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 SPOCD1Q6ZMY3 1216 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 ANKRD33Q7Z3H0 272 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 THAP5Q7Z6K1 395 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 SLITRK4Q8IW52 837 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 PHACTR4Q8IZ21 702 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 PIWIL2Q8TC59 973 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 ACER1Q8TDN7 264 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 RNF34Q969K3 372 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 MRRFQ96E11 262 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 TOX2Q96NM4 488 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 KIF2CQ99661 725 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 FEZ1Q99689 392 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 RIOK1Q9BRS2 568 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 SPATC1LQ9H0A9 340 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 RPAP3Q9H6T3 665 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 PIH1D3Q9NQM4 214 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 PDLIM7Q9NR12 457 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 SLC5A4Q9NY91 659 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 ZSWIM5Q9P217 1185 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 DBNLQ9UJU6 430 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 DIS3Q9Y2L1 958 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 PCDHGB7Q9Y5F8 929 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 MYH1P12882 1939 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 BDP1A6H8Y1 2624 aa6.16□□□□□ -1.42
R3HDM1-218ENST00000487294 A0A1W2PRG0 241 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 TRIM43BA6NCK2 446 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms