RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TMEM173Q86WV6 379 aaPredicted RBP21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 TMEM169Q96HH4 297 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 ZBP1Q9H171 429 aa21.94■■□□□ 1.1
SMPDL3A-202ENST00000487215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 HMGB1P09429 215 aaKnown RBP21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 NID2Q14112 1375 aa21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 TARBP2Q15633 366 aaKnown RBP21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 VPS52Q8N1B4 723 aa21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 C12orf76Q8N812 135 aaPredicted RBP21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 AUTS2Q8WXX7 1259 aa21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 PHKBQ93100 1093 aa21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 RIT2Q99578 217 aa21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 UNC45AQ9H3U1 944 aa21.93■■□□□ 1.1
SMPDL3A-202ENST00000487215 GAS7O60861 476 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 ZC3H11AO75152 810 aaKnown RBP eCLIP21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 ASGR2P07307 311 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 SFNP31947 248 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 PHKA2P46019 1235 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 JAK3P52333 1124 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 BMS1Q14692 1282 aaKnown RBP21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 KIAA1841Q6NSI8 718 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 KANK3Q6NY19 840 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 Q6ZUG5 572 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 TMEM105Q8N8V8 129 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 TDRD5Q8NAT2 981 aaKnown RBP21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 BICD2Q8TD16 824 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 SLC5A5Q92911 643 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 BRF1Q92994 677 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 CCDC136Q96JN2 1154 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 GCOM2Q9BZD3 368 aaPredicted RBP21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 CHST12Q9NRB3 414 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 DZANK1Q9NVP4 752 aa21.92■■□□□ 1.1
SMPDL3A-202ENST00000487215 WDR81Q562E7 1941 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 EPCAMP16422 314 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 LRCH2Q5VUJ6 765 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 ZDHHC14Q8IZN3 488 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 LPPQ93052 612 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 GJA10Q969M2 543 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 TEKT3Q9BXF9 490 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 SEPT9Q9UHD8 586 aaPredicted RBP21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 PLXNA3P51805 1871 aa21.91■■□□□ 1.1
SMPDL3A-202ENST00000487215 CACNA1HO95180 2353 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 TMEM150BA6NC51 233 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 PROB1E7EW31 1015 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 CTSAP10619 480 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 POLGP54098 1239 aaPredicted RBP21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 MTERF2Q49AM1 385 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 ATAT1Q5SQI0 421 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 CCDC148Q8NFR7 591 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 BCL7CQ8WUZ0 217 aaPredicted RBP21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 RSPH1Q8WYR4 309 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 IGSF21Q96ID5 467 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 CEP89Q96ST8 783 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 TRAIPQ9BWF2 469 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 NIFKQ9BYG3 293 aaKnown RBP21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 VPS54Q9P1Q0 977 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 DBR1Q9UK59 544 aaKnown RBP21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 IRAK3Q9Y616 596 aa21.9■■□□□ 1.1
SMPDL3A-202ENST00000487215 A0A087WZ62 844 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 SFPQP23246 707 aaKnown RBP eCLIP21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 USP11P51784 963 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 AKAP17AQ02040 695 aaKnown RBP21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 GIT2Q14161 759 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 NTRK3Q16288 839 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 LONRF3Q496Y0 759 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 TWF2Q6IBS0 349 aaKnown RBP21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 DDX53Q86TM3 631 aaKnown RBP21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 TMEM87AQ8NBN3 555 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 FEZF2Q8TBJ5 459 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 SLC22A17Q8WUG5 538 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 SH2D3AQ9BRG2 576 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 FDXACB1Q9BRP7 624 aaPredicted RBP21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 RNF26Q9BY78 433 aaPredicted RBP21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 NRDE2Q9H7Z3 1164 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 TBC1D13Q9NVG8 400 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 LIMD1Q9UGP4 676 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 USTQ9Y2C2 406 aa21.89■■□□□ 1.09
SMPDL3A-202ENST00000487215 IGKV6-21A0A0C4DH24 114 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 MEIS3P2A8K0S8 358 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 PSMD10O75832 226 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 STBD1O95210 358 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 GALTP07902 379 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 CDC42EP1Q00587 391 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 XKR3Q5GH77 459 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 GLB1LQ6UWU2 654 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 ASCL5Q7RTU5 278 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 MIER3Q7Z3K6 550 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 PLCD3Q8N3E9 789 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 RDM1Q8NG50 284 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 JAKMIP1Q96N16 626 aaKnown RBP21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 SLC26A6Q9BXS9 759 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 PIN4Q9Y237 131 aaKnown RBP21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 INPP5FQ9Y2H2 1132 aa21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 ZFHX2Q9C0A1 2572 aaPredicted RBP21.88■■□□□ 1.09
SMPDL3A-202ENST00000487215 CFAP54Q96N23 3096 aa21.87■■□□□ 1.09
SMPDL3A-202ENST00000487215 CARNS1A5YM72 827 aa21.87■■□□□ 1.09
SMPDL3A-202ENST00000487215 SKIP12755 728 aa21.87■■□□□ 1.09
SMPDL3A-202ENST00000487215 NOMO2Q5JPE7 1267 aa21.87■■□□□ 1.09
SMPDL3A-202ENST00000487215 ASTLQ6HA08 431 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms