RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 AGBL4Q5VU57 503 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 FOXB2Q5VYV0 432 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 SPATC1Q76KD6 591 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 IFNL3Q8IZI9 196 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 FUKQ8N0W3 1084 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.68□□□□□ -1.57e-13■□□□□ 10.5
SNRNP40-205ENST00000486941 NEIL1Q96FI4 390 aaPredicted RBP5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 CAMKK2Q96RR4 588 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 CDK19Q9BWU1 502 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 ATP7BP35670 1465 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 KIAA1210Q9ULL0 1709 aa5.68□□□□□ -1.5
SNRNP40-205ENST00000486941 POLR3AO14802 1390 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 PHRF1Q9P1Y6 1649 aaKnown RBP5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 H0Y858 1186 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 OVOL3O00110 214 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 ADCY3O60266 1144 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 EVA1CP58658 441 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 ZC3H6P61129 1189 aaKnown RBP5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 SEC23AQ15436 765 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 EZH2Q15910 746 aaKnown RBP5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 ZNF503Q96F45 646 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 MENTQ9BUN1 341 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 ACEP12821 1306 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 PARD3Q8TEW0 1356 aa5.67□□□□□ -1.5
SNRNP40-205ENST00000486941 TOPAZ1Q8N9V7 1692 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 ESYT3A0FGR9 886 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 NPIPB8E9PQR5 432 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 MAN2B1O00754 1011 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 C6orf222P0C671 652 aaPredicted RBP5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 DGCR2P98153 550 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 FOXE3Q13461 319 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 RAB33AQ14088 237 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 USP10Q14694 798 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 LARP4Q71RC2 724 aaKnown RBP eCLIP5.66□□□□□ -1.52e-6■■■■■ 32.5
SNRNP40-205ENST00000486941 REXO1L1PQ8IX06 675 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 TCP11L2Q8N4U5 519 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 EXTL1Q92935 676 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 ADOQ96SZ5 270 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 CBLCQ9ULV8 474 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 THRAP3Q9Y2W1 955 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 BRD4O60885 1362 aaPredicted RBP5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 CPDO75976 1380 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 CAMTA1Q9Y6Y1 1673 aa5.66□□□□□ -1.5
SNRNP40-205ENST00000486941 SSH2Q76I76 1423 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 TRAV20A0A0B4J274 112 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 FAM47E-STBD1D6RA91 191 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 WNT9AO14904 365 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 GCP02774 474 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 PTPN1P18031 435 aaKnown RBP5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 POLD1P28340 1107 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 IFRD2Q12894 506 aaPredicted RBP5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 BTBD8Q5XKL5 378 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 FSTL4Q6MZW2 842 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 OSTM1Q86WC4 334 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 SLC43A3Q8NBI5 491 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 ST13P5Q8NFI4 369 aaPredicted RBP5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 PCDH19Q8TAB3 1148 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 CFHR4Q92496 578 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 DPYSL5Q9BPU6 564 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 BTBD7Q9P203 1132 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 USP35Q9P2H5 1018 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 SRPK3Q9UPE1 567 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 MSRB2Q9Y3D2 182 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 PCDHA8Q9Y5H6 950 aa5.65□□□□□ -1.5
SNRNP40-205ENST00000486941 USP19O94966 1318 aa5.65□□□□□ -1.51
SNRNP40-205ENST00000486941 LMO7Q8WWI1 1683 aa5.65□□□□□ -1.51
SNRNP40-205ENST00000486941 RREB1Q92766 1687 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 MPIG6BO95866 241 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 C4BPAP04003 597 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 GNL2Q13823 731 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 TM4SF20Q53R12 229 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 FAM209AQ5JX71 171 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 MIIPQ5JXC2 388 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 RNF207Q6ZRF8 634 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 ARHGAP36Q6ZRI8 547 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 EDAQ92838 391 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 CARD11Q9BXL7 1154 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 SEMA4AQ9H3S1 761 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 PARP4Q9UKK3 1724 aaKnown RBP5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 SBF2Q86WG5 1849 aa5.64□□□□□ -1.51
SNRNP40-205ENST00000486941 NRKQ7Z2Y5 1582 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 NUP188Q5SRE5 1749 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 KCNK3O14649 394 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 PYGMP11217 842 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 PDE6AP16499 860 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 MC4RP32245 332 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 RRADP55042 308 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 JAM2P57087 298 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 IL13RA1P78552 427 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 PTRH1Q86Y79 214 aaKnown RBP5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 GIMAP8Q8ND71 665 aaPredicted RBP5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 SPATA9Q9BWV2 254 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 AMNQ9BXJ7 453 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 IGSF5Q9NSI5 407 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 CENPJQ9HC77 1338 aaPredicted RBP5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 PPIP5K1Q6PFW1 1433 aa5.63□□□□□ -1.51
SNRNP40-205ENST00000486941 IQCA1LA6NCM1 817 aa5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 NARSO43776 548 aaKnown RBP5.62□□□□□ -1.51
SNRNP40-205ENST00000486941 RAD17O75943 681 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms