RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 KSR1Q8IVT5 923 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 IGSF22Q8N9C0 903 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 PRPF31Q8WWY3 499 aaKnown RBP17.78■□□□□ 0.44
HDAC8-218ENST00000486704 TMEM143Q96AN5 459 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 CCDC43Q96MW1 224 aaKnown RBP17.78■□□□□ 0.44
HDAC8-218ENST00000486704 TRAIPQ9BWF2 469 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 RAB34Q9BZG1 259 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 CHST12Q9NRB3 414 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 DACT1Q9NYF0 836 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 STK24Q9Y6E0 443 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 FGFR4P22455 802 aa17.77■□□□□ 0.44
HDAC8-218ENST00000486704 CTNNB1P35222 781 aa17.77■□□□□ 0.44
HDAC8-218ENST00000486704 BMPR1AP36894 532 aa17.77■□□□□ 0.44
HDAC8-218ENST00000486704 MXD4Q14582 209 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-218ENST00000486704 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
HDAC8-218ENST00000486704 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
HDAC8-218ENST00000486704 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.44
HDAC8-218ENST00000486704 NACC1Q96RE7 527 aa17.77■□□□□ 0.44
HDAC8-218ENST00000486704 C11orf84Q9BUA3 381 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-218ENST00000486704 PLVAPQ9BX97 442 aa17.77■□□□□ 0.44
HDAC8-218ENST00000486704 BMP2KQ9NSY1 1161 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-218ENST00000486704 MRPL42Q9Y6G3 142 aaKnown RBP17.77■□□□□ 0.44
HDAC8-218ENST00000486704 A0A0U1RQF3 1178 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 HOXA2O43364 376 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 CSDE1O75534 798 aaKnown RBP17.76■□□□□ 0.43
HDAC8-218ENST00000486704 PDCP20941 246 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 ATP2C1P98194 919 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-218ENST00000486704 POU5F1BQ06416 359 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 CCDC85BQ15834 202 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-218ENST00000486704 PTPROQ16827 1216 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 POTEGQ6S5H5 508 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 ECHDC2Q86YB7 292 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
HDAC8-218ENST00000486704 MICALL1Q8N3F8 863 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 PPM1EQ8WY54 764 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 P2RX5Q93086 422 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 MRPL38Q96DV4 380 aaKnown RBP17.76■□□□□ 0.43
HDAC8-218ENST00000486704 INTS4Q96HW7 963 aaKnown RBP17.76■□□□□ 0.43
HDAC8-218ENST00000486704 AGPAT5Q9NUQ2 364 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 THEGQ9P2T0 379 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 LRWD1Q9UFC0 647 aa17.76■□□□□ 0.43
HDAC8-218ENST00000486704 K7ELQ4 463 aaPredicted RBP17.75■□□□□ 0.43
HDAC8-218ENST00000486704 ARL2P36404 184 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 PHKA2P46019 1235 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 GATMP50440 423 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 GPM6BQ13491 265 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 PCBP1Q15365 356 aaKnown RBP eCLIP17.75■□□□□ 0.43
HDAC8-218ENST00000486704 PAN2Q504Q3 1202 aaKnown RBP17.75■□□□□ 0.43
HDAC8-218ENST00000486704 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 CATSPER4Q7RTX7 472 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 BRAPQ7Z569 592 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 ZNF598Q86UK7 904 aaKnown RBP17.75■□□□□ 0.43
HDAC8-218ENST00000486704 RNF149Q8NC42 400 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 MCPH1Q8NEM0 835 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 RSPH1Q8WYR4 309 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 NFKBIZQ9BYH8 718 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 LMAN2LQ9H0V9 348 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 RNF19AQ9NV58 838 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 PIN4Q9Y237 131 aaKnown RBP17.75■□□□□ 0.43
HDAC8-218ENST00000486704 A0A0C4DFX4 3053 aa17.75■□□□□ 0.43
HDAC8-218ENST00000486704 BRWD1Q9NSI6 2320 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 USO1O60763 962 aaKnown RBP17.74■□□□□ 0.43
HDAC8-218ENST00000486704 EOMESO95936 686 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 FGFR1P11362 822 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 ATF7P17544 494 aaPredicted RBP17.74■□□□□ 0.43
HDAC8-218ENST00000486704 RAB27AP51159 221 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 TFDP1Q14186 410 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 TIGD5Q53EQ6 642 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 FAM102BQ5T8I3 360 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 MINDY3Q9H8M7 445 aa17.74■□□□□ 0.43
HDAC8-218ENST00000486704 MYH11P35749 1972 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 TBKBP1A7MCY6 615 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 SRGAP2CP0DJJ0 459 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 SKIP12755 728 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 CCT6AP40227 531 aaKnown RBP17.73■□□□□ 0.43
HDAC8-218ENST00000486704 PTENP60484 403 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 CAPSQ13938 189 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 IL17AQ16552 155 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 ARL6IP4Q66PJ3 421 aaKnown RBP17.73■□□□□ 0.43
HDAC8-218ENST00000486704 TWF2Q6IBS0 349 aaKnown RBP17.73■□□□□ 0.43
HDAC8-218ENST00000486704 DTHD1Q6ZMT9 781 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 ASAP3Q8TDY4 903 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 ATXN2LQ8WWM7 1075 aaKnown RBP17.73■□□□□ 0.43
HDAC8-218ENST00000486704 SNX21Q969T3 373 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 PRDM6Q9NQX0 595 aa17.73■□□□□ 0.43
HDAC8-218ENST00000486704 ARHGEF35A5YM69 484 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 ZNF623O75123 536 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
HDAC8-218ENST00000486704 GLRA2P23416 452 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 ECM1Q16610 540 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 KRT79Q5XKE5 535 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 LRRC43Q8N309 656 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 POLR3FQ9H1D9 316 aaPredicted RBP17.72■□□□□ 0.43
HDAC8-218ENST00000486704 FAM105AQ9NUU6 356 aa17.72■□□□□ 0.43
HDAC8-218ENST00000486704 TDRD15B5MCY1 1934 aaKnown RBP17.71■□□□□ 0.43
HDAC8-218ENST00000486704 A0A087WWV3 80 aa17.71■□□□□ 0.43
HDAC8-218ENST00000486704 VPS37CA5D8V6 355 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms