RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 COG5Q9UP83 839 aa20.42■□□□□ 0.86
CLDN11-206ENST00000486429 SMC3Q9UQE7 1217 aa20.42■□□□□ 0.86
CLDN11-206ENST00000486429 FNDC1Q4ZHG4 1894 aaPredicted RBP20.41■□□□□ 0.86
CLDN11-206ENST00000486429 H3BQV1 296 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 DGAT1O75907 488 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 LAMTOR4Q0VGL1 99 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 FAM102BQ5T8I3 360 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 HAUS3Q68CZ6 603 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 CATSPER4Q7RTX7 472 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 ECHDC2Q86YB7 292 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 ASB2Q96Q27 587 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 LMAN2LQ9H0V9 348 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 CHST12Q9NRB3 414 aa20.41■□□□□ 0.86
CLDN11-206ENST00000486429 PIN4Q9Y237 131 aaKnown RBP20.41■□□□□ 0.86
CLDN11-206ENST00000486429 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.41■□□□□ 0.86
CLDN11-206ENST00000486429 RARRES1P49788 294 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 AAK1Q2M2I8 961 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 SPOUT1Q5T280 376 aaKnown RBP20.4■□□□□ 0.86
CLDN11-206ENST00000486429 FERMT3Q86UX7 667 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 ABI1Q8IZP0 508 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 RNF169Q8NCN4 708 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 PIGOQ8TEQ8 1089 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 SYMPKQ92797 1274 aaKnown RBP20.4■□□□□ 0.86
CLDN11-206ENST00000486429 P2RX5Q93086 422 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 BACH2Q9BYV9 841 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 TMEM117Q9H0C3 514 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 IFT122Q9HBG6 1241 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 XPNPEP1Q9NQW7 623 aa20.4■□□□□ 0.86
CLDN11-206ENST00000486429 A0A0U1RQF3 1178 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 GRM6O15303 877 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 ASAP2O43150 1006 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 MED24O75448 989 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 SRGAP2CP0DJJ0 459 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 SPATA31C1P0DKV0 1188 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 PHKA2P46019 1235 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 TOB1P50616 345 aaPredicted RBP20.39■□□□□ 0.85
CLDN11-206ENST00000486429 FXR2P51116 673 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLDN11-206ENST00000486429 NAALADL2Q58DX5 795 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 TWF2Q6IBS0 349 aaKnown RBP20.39■□□□□ 0.85
CLDN11-206ENST00000486429 POTEGQ6S5H5 508 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 SRGAP1Q7Z6B7 1085 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 CATSPER3Q86XQ3 398 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 RNF149Q8NC42 400 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 HLA-CQ95604 372 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 POLR3CQ9BUI4 534 aaPredicted RBP20.39■□□□□ 0.85
CLDN11-206ENST00000486429 NSUN3Q9H649 340 aaKnown RBP20.39■□□□□ 0.85
CLDN11-206ENST00000486429 AAASQ9NRG9 546 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 PCDHB6Q9Y5E3 794 aa20.39■□□□□ 0.85
CLDN11-206ENST00000486429 USO1O60763 962 aaKnown RBP20.38■□□□□ 0.85
CLDN11-206ENST00000486429 XRCC6P12956 609 aaKnown RBP eCLIP20.38■□□□□ 0.85
CLDN11-206ENST00000486429 TFF2Q03403 129 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 PTGDRQ13258 359 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 TFDP1Q14186 410 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 MXD4Q14582 209 aaPredicted RBP20.38■□□□□ 0.85
CLDN11-206ENST00000486429 RILPL1Q5EBL4 403 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 LRRC43Q8N309 656 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 C4orf32Q8N8J7 132 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 RAB34Q9BZG1 259 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 AGPAT5Q9NUQ2 364 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 RNF19AQ9NV58 838 aa20.38■□□□□ 0.85
CLDN11-206ENST00000486429 ATG2AQ2TAZ0 1938 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 LAD1O00515 517 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 EOMESO95936 686 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 SKIP12755 728 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 ATF7P17544 494 aaPredicted RBP20.37■□□□□ 0.85
CLDN11-206ENST00000486429 RPA1P27694 616 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 ZNF598Q86UK7 904 aaKnown RBP20.37■□□□□ 0.85
CLDN11-206ENST00000486429 KLHL23Q8NBE8 558 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 NACC1Q96RE7 527 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 TRAIPQ9BWF2 469 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 ALG13Q9NP73 1137 aaKnown RBP20.37■□□□□ 0.85
CLDN11-206ENST00000486429 HCSTQ9UBK5 93 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 DBR1Q9UK59 544 aaKnown RBP20.37■□□□□ 0.85
CLDN11-206ENST00000486429 PLAGL2Q9UPG8 496 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 PCDHB12Q9Y5F1 795 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 TTC28Q96AY4 2481 aa20.37■□□□□ 0.85
CLDN11-206ENST00000486429 A0A087WWV3 80 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 CSPG5O95196 566 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 ITGB1P05556 798 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 LAG3P18627 525 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 RAB27AP51159 221 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 CAPSQ13938 189 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 CSPP1Q1MSJ5 1256 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 TCEAL5Q5H9L2 206 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 CLLU1OSQ5K130 101 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 ASAP3Q8TDY4 903 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 POLR3FQ9H1D9 316 aaPredicted RBP20.36■□□□□ 0.85
CLDN11-206ENST00000486429 UBE2ZQ9H832 354 aaPredicted RBP20.36■□□□□ 0.85
CLDN11-206ENST00000486429 MINDY3Q9H8M7 445 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.36■□□□□ 0.85
CLDN11-206ENST00000486429 TYW1Q9NV66 732 aaKnown RBP20.36■□□□□ 0.85
CLDN11-206ENST00000486429 LRWD1Q9UFC0 647 aa20.36■□□□□ 0.85
CLDN11-206ENST00000486429 ERLIN2O94905 339 aa20.35■□□□□ 0.85
CLDN11-206ENST00000486429 MUTP22033 750 aa20.35■□□□□ 0.85
CLDN11-206ENST00000486429 ARL2P36404 184 aa20.35■□□□□ 0.85
CLDN11-206ENST00000486429 CCT6AP40227 531 aaKnown RBP20.35■□□□□ 0.85
CLDN11-206ENST00000486429 COLGALT1Q8NBJ5 622 aa20.35■□□□□ 0.85
CLDN11-206ENST00000486429 MCPH1Q8NEM0 835 aa20.35■□□□□ 0.85
CLDN11-206ENST00000486429 HELQQ8TDG4 1101 aa20.35■□□□□ 0.85
CLDN11-206ENST00000486429 SNX29Q8TEQ0 813 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms