RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 USO1O60763 962 aaKnown RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 LYPLA2O95372 231 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 SPATA31C1P0DKV0 1188 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 CCT6AP40227 531 aaKnown RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 TOB1P50616 345 aaPredicted RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 TFF2Q03403 129 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 PTGDRQ13258 359 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 LONRF3Q496Y0 759 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 TJAP1Q5JTD0 557 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 TWF2Q6IBS0 349 aaKnown RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 FERMT3Q86UX7 667 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 CATSPER3Q86XQ3 398 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 ABI1Q8IZP0 508 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 RNF149Q8NC42 400 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 CLP1Q92989 425 aaKnown RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 HLA-CQ95604 372 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 NACC1Q96RE7 527 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 ELAC1Q9H777 363 aaKnown RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 TUFT1Q9NNX1 390 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 CHST12Q9NRB3 414 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 TYW1Q9NV66 732 aaKnown RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 DACT1Q9NYF0 836 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 PRUNE2Q8WUY3 3088 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 NLRC5Q86WI3 1866 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 C5orf67F2Z3F1 127 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 HOXA2O43364 376 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 DGAT1O75907 488 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 LINC00271P0C7V0 271 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 XRCC6P12956 609 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX21-211ENST00000486336 RARRES1P49788 294 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 TFDP1Q14186 410 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 C4orf32Q8N8J7 132 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 KLHL23Q8NBE8 558 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 SYMPKQ92797 1274 aaKnown RBP12.28□□□□□ -0.44
SNX21-211ENST00000486336 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
SNX21-211ENST00000486336 PLVAPQ9BX97 442 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 XPNPEP1Q9NQW7 623 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 AAASQ9NRG9 546 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 LRWD1Q9UFC0 647 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 COG5Q9UP83 839 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 PLAGL2Q9UPG8 496 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 PCDHB12Q9Y5F1 795 aa12.28□□□□□ -0.44
SNX21-211ENST00000486336 A0A0U1RQF3 1178 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 ARHGEF35A5YM69 484 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 EOMESO95936 686 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 RPA1P27694 616 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 PHKA2P46019 1235 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 MXD4Q14582 209 aaPredicted RBP12.27□□□□□ -0.45
SNX21-211ENST00000486336 AAK1Q2M2I8 961 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 TIGD5Q53EQ6 642 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 TCEAL5Q5H9L2 206 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 HAUS3Q68CZ6 603 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 DTHD1Q6ZMT9 781 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 HELQQ8TDG4 1101 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 LPPQ93052 612 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 CASD1Q96PB1 797 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 RAB34Q9BZG1 259 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 LMAN2LQ9H0V9 348 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.45
SNX21-211ENST00000486336 NSUN3Q9H649 340 aaKnown RBP12.27□□□□□ -0.45
SNX21-211ENST00000486336 IGFLR1Q9H665 355 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 MINDY3Q9H8M7 445 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 HCSTQ9UBK5 93 aa12.27□□□□□ -0.45
SNX21-211ENST00000486336 INO80B-WBP1J3KQ70 363 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 ERLIN2O94905 339 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 ITGB1P05556 798 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 SKIP12755 728 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNX21-211ENST00000486336 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
SNX21-211ENST00000486336 ZRSR1Q15695 479 aaKnown RBP12.26□□□□□ -0.45
SNX21-211ENST00000486336 NAALADL2Q58DX5 795 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 RILPL1Q5EBL4 403 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 THNSL1Q8IYQ7 743 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 COLGALT1Q8NBJ5 622 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 SPPL3Q8TCT6 385 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 MICAL1Q8TDZ2 1067 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 SNX29Q8TEQ0 813 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 POF1BQ8WVV4 589 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 P2RX5Q93086 422 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 GPRC5CQ9NQ84 441 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.26□□□□□ -0.45
SNX21-211ENST00000486336 FAM105AQ9NUU6 356 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 RNF19AQ9NV58 838 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 DBR1Q9UK59 544 aaKnown RBP12.26□□□□□ -0.45
SNX21-211ENST00000486336 KIAA1024Q9UPX6 916 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 INPP5FQ9Y2H2 1132 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 COL4A6Q14031 1691 aa12.26□□□□□ -0.45
SNX21-211ENST00000486336 RALGAPA2Q2PPJ7 1873 aa12.25□□□□□ -0.45
SNX21-211ENST00000486336 TRANK1O15050 2925 aa12.25□□□□□ -0.45
SNX21-211ENST00000486336 A0A0C4DFX4 3053 aa12.25□□□□□ -0.45
SNX21-211ENST00000486336 VPS37CA5D8V6 355 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms