RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 PTPRZ1P23471 2315 aaPredicted RBP18.25■□□□□ 0.51
PDE6D-205ENST00000486044 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.25■□□□□ 0.51
PDE6D-205ENST00000486044 HMGB1P09429 215 aaKnown RBP18.25■□□□□ 0.51
PDE6D-205ENST00000486044 SKIP12755 728 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 CDC27P30260 824 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 SFNP31947 248 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 CIITAP33076 1130 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 CLCN5P51795 746 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 KIAA1841Q6NSI8 718 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 TMEM105Q8N8V8 129 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 ZNF668Q96K58 619 aaPredicted RBP18.25■□□□□ 0.51
PDE6D-205ENST00000486044 GCOM2Q9BZD3 368 aaPredicted RBP18.25■□□□□ 0.51
PDE6D-205ENST00000486044 FAM217BQ9NTX9 383 aaPredicted RBP18.25■□□□□ 0.51
PDE6D-205ENST00000486044 LIMD1Q9UGP4 676 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 IRAK3Q9Y616 596 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 CFAP54Q96N23 3096 aa18.25■□□□□ 0.51
PDE6D-205ENST00000486044 NT5C1B-RDH14C9J2C7 533 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 NBL1P41271 181 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 DNM2P50570 870 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 PRKCEQ02156 737 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 TSGA10IPQ3SY00 556 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 PPFIBP1Q86W92 1011 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 RIT2Q99578 217 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 TRAIPQ9BWF2 469 aa18.24■□□□□ 0.51
PDE6D-205ENST00000486044 INO80BQ9C086 356 aaPredicted RBP18.24■□□□□ 0.51
PDE6D-205ENST00000486044 ZNF862O60290 1169 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 ZC3H11AO75152 810 aaKnown RBP eCLIP18.23■□□□□ 0.51
PDE6D-205ENST00000486044 ASGR2P07307 311 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 WEE2P0C1S8 567 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 CTSAP10619 480 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 ADD1P35611 737 aaKnown RBP18.23■□□□□ 0.51
PDE6D-205ENST00000486044 JAK3P52333 1124 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 AKAP17AQ02040 695 aaKnown RBP18.23■□□□□ 0.51
PDE6D-205ENST00000486044 GLB1LQ6UWU2 654 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 DDX53Q86TM3 631 aaKnown RBP18.23■□□□□ 0.51
PDE6D-205ENST00000486044 CABP7Q86V35 215 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 C12orf76Q8N812 135 aaPredicted RBP18.23■□□□□ 0.51
PDE6D-205ENST00000486044 ACSF2Q96CM8 615 aaPredicted RBP18.23■□□□□ 0.51
PDE6D-205ENST00000486044 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 CYP26B1Q9NR63 512 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 STK39Q9UEW8 545 aa18.23■□□□□ 0.51
PDE6D-205ENST00000486044 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
PDE6D-205ENST00000486044 GAS7O60861 476 aa18.22■□□□□ 0.51
PDE6D-205ENST00000486044 FGFR4P22455 802 aa18.22■□□□□ 0.51
PDE6D-205ENST00000486044 SFPQP23246 707 aaKnown RBP eCLIP18.22■□□□□ 0.51
PDE6D-205ENST00000486044 PHKA2P46019 1235 aa18.22■□□□□ 0.51
PDE6D-205ENST00000486044 RNASELQ05823 741 aaKnown RBP18.22■□□□□ 0.51
PDE6D-205ENST00000486044 TWF2Q6IBS0 349 aaKnown RBP18.22■□□□□ 0.51
PDE6D-205ENST00000486044 ASCL5Q7RTU5 278 aa18.22■□□□□ 0.51
PDE6D-205ENST00000486044 IGSF21Q96ID5 467 aa18.22■□□□□ 0.51
PDE6D-205ENST00000486044 PLXNA3P51805 1871 aa18.22■□□□□ 0.51
PDE6D-205ENST00000486044 PRR23AA6NEV1 266 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 PRPF3O43395 683 aaKnown RBP18.21■□□□□ 0.51
PDE6D-205ENST00000486044 EPCAMP16422 314 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 USP11P51784 963 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 NOMO2Q5JPE7 1267 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 LRCH2Q5VUJ6 765 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 OTOP3Q7RTS5 596 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 CCDC148Q8NFR7 591 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 RDM1Q8NG50 284 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 SLC22A17Q8WUG5 538 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 NKD2Q969F2 451 aaPredicted RBP18.21■□□□□ 0.51
PDE6D-205ENST00000486044 LENG9Q96B70 501 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 CCDC136Q96JN2 1154 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 TEKT3Q9BXF9 490 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 SMOC2Q9H3U7 446 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 WDR81Q562E7 1941 aa18.21■□□□□ 0.51
PDE6D-205ENST00000486044 MSH4O15457 936 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 CHMP2AO43633 222 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 CSDE1O75534 798 aaKnown RBP18.2■□□□□ 0.5
PDE6D-205ENST00000486044 RAB27AP51159 221 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 TARBP2Q15633 366 aaKnown RBP18.2■□□□□ 0.5
PDE6D-205ENST00000486044 XKR3Q5GH77 459 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 TMC5Q6UXY8 1006 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 ZNF410Q86VK4 478 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 AUTS2Q8WXX7 1259 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 EMILIN2Q9BXX0 1053 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 NIFKQ9BYG3 293 aaKnown RBP18.2■□□□□ 0.5
PDE6D-205ENST00000486044 SFXN1Q9H9B4 322 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 TBC1D13Q9NVG8 400 aa18.2■□□□□ 0.5
PDE6D-205ENST00000486044 SEPT9Q9UHD8 586 aaPredicted RBP18.2■□□□□ 0.5
PDE6D-205ENST00000486044 ADAMTS3O15072 1205 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 GALTP07902 379 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 TDGQ13569 410 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 UGCGQ16739 394 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 MTERF2Q49AM1 385 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 KANK3Q6NY19 840 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 CCDC149Q6ZUS6 474 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 GPR149Q86SP6 731 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 TMEM173Q86WV6 379 aaPredicted RBP18.19■□□□□ 0.5
PDE6D-205ENST00000486044 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 FLCNQ8NFG4 579 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 SLC5A5Q92911 643 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 PGBD4Q96DM1 585 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 NRDE2Q9H7Z3 1164 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 FAM105AQ9NUU6 356 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 PIN4Q9Y237 131 aaKnown RBP18.19■□□□□ 0.5
PDE6D-205ENST00000486044 INPP5FQ9Y2H2 1132 aa18.19■□□□□ 0.5
PDE6D-205ENST00000486044 RIF1Q5UIP0 2472 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms