RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 CCDC83Q8IWF9 413 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 FIBCD1Q8N539 461 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 METTL13Q8N6R0 699 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 NEK9Q8TD19 979 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 TMEM40Q8WWA1 233 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 LINC01599Q8WXQ3 324 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 C8orf76Q96K31 380 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 LMAN2LQ9H0V9 348 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 DHX33Q9H6R0 707 aaKnown RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 TTC12Q9H892 705 aaPredicted RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 UPF2Q9HAU5 1272 aaKnown RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 CYP26B1Q9NR63 512 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 ANKEF1Q9NU02 776 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 FNDC1Q4ZHG4 1894 aaPredicted RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 ADGRA3Q8IWK6 1321 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 REV3LO60673 3130 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 A0A0U1RQF3 1178 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 DLL1O00548 723 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 CHMP2AO43633 222 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 NCK2O43639 380 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 MARCH6O60337 910 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 MGEA5O60502 916 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 VTNP04004 478 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 ZSCAN20P17040 1043 aaPredicted RBP7.84□□□□□ -1.15
VPS50-218ENST00000485994 RFC5P40937 340 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 CLCN3P51790 818 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 TMEM62Q0P6H9 643 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 NFX1Q12986 1120 aaKnown RBP7.84□□□□□ -1.15
VPS50-218ENST00000485994 PDIA5Q14554 519 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 COL19A1Q14993 1142 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 PCBP1Q15365 356 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS50-218ENST00000485994 CALCRLQ16602 461 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 PTPROQ16827 1216 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 AAK1Q2M2I8 961 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 TJAP1Q5JTD0 557 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 FAM117BQ6P1L5 589 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 SPRED2Q7Z698 418 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 C4orf32Q8N8J7 132 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 MRPL38Q96DV4 380 aaKnown RBP7.84□□□□□ -1.15
VPS50-218ENST00000485994 TBC1D32Q96NH3 1257 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 ASB2Q96Q27 587 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 OSMRQ99650 979 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 ADAM2Q99965 735 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 EIF2AK1Q9BQI3 630 aaKnown RBP7.84□□□□□ -1.15
VPS50-218ENST00000485994 C17orf80Q9BSJ5 609 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 GCOM2Q9BZD3 368 aaPredicted RBP7.84□□□□□ -1.15
VPS50-218ENST00000485994 CERS4Q9HA82 394 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 TMEM161AQ9NX61 479 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 AKT3Q9Y243 479 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 KIF3AQ9Y496 699 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 PCDHB7Q9Y5E2 793 aa7.84□□□□□ -1.15
VPS50-218ENST00000485994 VCANP13611 3396 aa7.84□□□□□ -1.16
VPS50-218ENST00000485994 DENND3A2RUS2 1198 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 CARNS1A5YM72 827 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 HOXA2O43364 376 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 NEMFO60524 1076 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 DTNBO60941 627 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 ZNF623O75123 536 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 SKIP12755 728 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 BMP1P13497 986 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 YWHABP31946 246 aaKnown RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 GPM6BQ13491 265 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 BTG3Q14201 252 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 MXD4Q14582 209 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 CSPP1Q1MSJ5 1256 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 TMEM266Q2M3C6 531 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 MTERF2Q49AM1 385 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 TRMT1LQ7Z2T5 733 aaKnown RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 SRGAP1Q7Z6B7 1085 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 NOSTRINQ8IVI9 506 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 LRRC71Q8N4P6 559 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 KCTD17Q8N5Z5 321 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 FAM184AQ8NB25 1140 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 BANK1Q8NDB2 785 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 TCP11Q8WWU5 503 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 SLC7A3Q8WY07 619 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 HLA-CQ95604 372 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 DYDC2Q96IM9 177 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 CEP170P1Q96L14 293 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 LXNQ9BS40 222 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 C11orf84Q9BUA3 381 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 POLR3CQ9BUI4 534 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 COL25A1Q9BXS0 654 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 IFT122Q9HBG6 1241 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 TUFT1Q9NNX1 390 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 DACT1Q9NYF0 836 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 RGL1Q9NZL6 768 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 SUCLA2Q9P2R7 463 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 WRAP73Q9P2S5 460 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 THEGQ9P2T0 379 aa7.83□□□□□ -1.16
VPS50-218ENST00000485994 SEPT9Q9UHD8 586 aaPredicted RBP7.83□□□□□ -1.16
VPS50-218ENST00000485994 A0A087WZ62 844 aa7.82□□□□□ -1.16
VPS50-218ENST00000485994 BDP1A6H8Y1 2624 aa7.82□□□□□ -1.16
VPS50-218ENST00000485994 LAD1O00515 517 aa7.82□□□□□ -1.16
VPS50-218ENST00000485994 WNT7AO00755 349 aa7.82□□□□□ -1.16
VPS50-218ENST00000485994 DGAT1O75907 488 aa7.82□□□□□ -1.16
VPS50-218ENST00000485994 SPATA31C1P0DKV0 1188 aa7.82□□□□□ -1.16
VPS50-218ENST00000485994 RPA1P27694 616 aa7.82□□□□□ -1.16
VPS50-218ENST00000485994 TXKP42681 527 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms