RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 MYCT1Q8N699 235 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 ENOX1Q8TC92 643 aaKnown RBP12.49□□□□□ -0.41
SND1-212ENST00000485871 ZNF507Q8TCN5 953 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 LMBR1Q8WVP7 490 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 SLC7A3Q8WY07 619 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 TMEM143Q96AN5 459 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
SND1-212ENST00000485871 KATNAL1Q9BW62 490 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 KCTD10Q9H3F6 313 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 SPC25Q9HBM1 224 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 RWDD2AQ9UIY3 292 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 ZKSCAN5Q9Y2L8 839 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 BRCA2P51587 3418 aa12.49□□□□□ -0.41
SND1-212ENST00000485871 GRIN2DO15399 1336 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 UBE4BO95155 1302 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 NRCAMQ92823 1304 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 TRIM49BA6NDI0 452 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 RRN3P2A6NIE6 340 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 MAGEB2O15479 319 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 ASGR1P07306 291 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 NPTX2P47972 431 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 PEX3P56589 373 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 TPM4P67936 248 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 GTF2BQ00403 316 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 PAK1Q13153 545 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 KCNA10Q16322 511 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 IER5Q5VY09 327 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 KLHL10Q6JEL2 608 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 SARM1Q6SZW1 724 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 MTHFD1LQ6UB35 978 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 CXCL17Q6UXB2 119 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 SESTD1Q86VW0 696 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 EXOC8Q8IYI6 725 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 MYOCDQ8IZQ8 938 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 LRRC71Q8N4P6 559 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 PPP1R13LQ8WUF5 828 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 NELFBQ8WX92 580 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 P2RX5Q93086 422 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 DUSP9Q99956 384 aaKnown RBP12.48□□□□□ -0.41
SND1-212ENST00000485871 HTATIP2Q9BUP3 242 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 MRPL44Q9H9J2 332 aaKnown RBP12.48□□□□□ -0.41
SND1-212ENST00000485871 SETD4Q9NVD3 440 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 ARHGAP28Q9P2N2 729 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 CTNND2Q9UQB3 1225 aa12.48□□□□□ -0.41
SND1-212ENST00000485871 BECN2A8MW95 431 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 PSMA7O14818 248 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 ZNF500O60304 480 aaPredicted RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 ZEB2O60315 1214 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 PRPF6O94906 941 aaKnown RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 GCNT3O95395 438 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 CDC25BP30305 580 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 NAMPTP43490 491 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 CLCN3P51790 818 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 IGBP1P78318 339 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 MYL5Q02045 173 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 KCNA1Q09470 495 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 CAPSQ13938 189 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 ZC2HC1CQ53FD0 456 aaPredicted RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 EFCAB12Q6NXP0 572 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 TAS1R3Q7RTX0 852 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 ZC3H3Q8IXZ2 948 aaKnown RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 PCSK9Q8NBP7 692 aaKnown RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
SND1-212ENST00000485871 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 HDAC6Q9UBN7 1215 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 NR2E3Q9Y5X4 410 aa12.47□□□□□ -0.41
SND1-212ENST00000485871 SMTNL1A8MU46 457 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 K7ENM7 598 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 SLC16A4O15374 487 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 TGFB1I1O43294 461 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 AP5Z1O43299 807 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 CCL5P13501 91 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 ZNF18P17022 549 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 ACLYP53396 1101 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 STX17P56962 302 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 DMP1Q13316 513 aaPredicted RBP12.46□□□□□ -0.41
SND1-212ENST00000485871 STIM1Q13586 685 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 ALCAMQ13740 583 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 KNOP1Q1ED39 458 aaKnown RBP12.46□□□□□ -0.41
SND1-212ENST00000485871 NBPF20Q3BBV1 942 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 SPATA1Q5VX52 437 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 CDCA2Q69YH5 1023 aaPredicted RBP12.46□□□□□ -0.41
SND1-212ENST00000485871 ANKRD40Q6AI12 368 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 RNF180Q86T96 592 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.41
SND1-212ENST00000485871 KSR1Q8IVT5 923 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 TCP11Q8WWU5 503 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 PRPF31Q8WWY3 499 aaKnown RBP12.46□□□□□ -0.41
SND1-212ENST00000485871 PSPC1Q8WXF1 523 aaKnown RBP12.46□□□□□ -0.41
SND1-212ENST00000485871 HVCN1Q96D96 273 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 IKZF4Q9H2S9 585 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 SUGCTQ9HAC7 445 aa12.46□□□□□ -0.41
SND1-212ENST00000485871 RRAGDQ9NQL2 400 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms