RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 NOC2LQ9Y3T9 749 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 MICAL3Q7RTP6 2002 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 ASAP2O43150 1006 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 PRPF40AO75400 957 aaKnown RBP17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 PARNO95453 639 aaKnown RBP17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 FGFR4P22455 802 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 CD52P31358 61 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 RFC2P35250 354 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 MXD4Q14582 209 aaPredicted RBP17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 LONRF3Q496Y0 759 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 PLEKHG4Q58EX7 1191 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 FAM228AQ86W67 206 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 GRAMD1CQ8IYS0 662 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 DBF4BQ8NFT6 615 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 KIFAP3Q92845 792 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 CUEDC2Q9H467 287 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 MINDY3Q9H8M7 445 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 KBTBD4Q9NVX7 518 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 KCND2Q9NZV8 630 aa17.15■□□□□ 0.34
RPUSD3-217ENST00000485705 TRIOBPQ9H2D6 2365 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 KRT18P05783 430 aaKnown RBP17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 DARSP14868 501 aaKnown RBP17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 LIG1P18858 919 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 EIF4BP23588 611 aaKnown RBP17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 CASP1P29466 404 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 PEX3P56589 373 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 CDC42EP1Q00587 391 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 TMEM240Q5SV17 173 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 TSHZ1Q6ZSZ6 1077 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 RPUSD2Q8IZ73 545 aaKnown RBP17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 DDX12PQ92771 950 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 DNAJC19Q96DA6 116 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.14■□□□□ 0.338e-7■■■■■ 32.7
RPUSD3-217ENST00000485705 KIFC3Q9BVG8 833 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 TIPINQ9BVW5 301 aa17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 GCOM2Q9BZD3 368 aaPredicted RBP17.14■□□□□ 0.33
RPUSD3-217ENST00000485705 LRRIQ4A6NIV6 560 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 ZNF202O95125 648 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 AFMP43652 599 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 PTENP60484 403 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 TFDP1Q14186 410 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 C9orf50Q5SZB4 431 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 ZNF710Q8N1W2 664 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 ENGASEQ8NFI3 743 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 DRC1Q96MC2 740 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 IFIH1Q9BYX4 1025 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 TNMDQ9H2S6 317 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 ERVK-5Q9HDB9 667 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 PADI3Q9ULW8 664 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 ST3GAL5Q9UNP4 418 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 SQORQ9Y6N5 450 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 ADGRA3Q8IWK6 1321 aa17.13■□□□□ 0.33
RPUSD3-217ENST00000485705 FAM13AO94988 1023 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 NAMPTP43490 491 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 NPTX2P47972 431 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 NFX1Q12986 1120 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 PAK2Q13177 524 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 OTOP2Q7RTS6 562 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 CEP57L1Q8IYX8 460 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 SEPT8Q92599 483 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 PAGE5Q96GU1 130 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 IFT74Q96LB3 600 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 UBE2OQ9C0C9 1292 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 BLZF1Q9H2G9 400 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 ZHX3Q9H4I2 956 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 USP25Q9UHP3 1055 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 ODF2LQ9ULJ1 636 aa17.12■□□□□ 0.33
RPUSD3-217ENST00000485705 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 CCDC169A6NNP5 214 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 NR1I2O75469 434 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 FGBP02675 491 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 PFKMP08237 780 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 PLS3P13797 630 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 PHKA2P46019 1235 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 ZNF131P52739 623 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 UBE2HP62256 183 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 POU5F1BQ06416 359 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 CUL4BQ13620 913 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 SHHQ15465 462 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 CNKSR3Q6P9H4 555 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 IFNLR1Q8IU57 520 aaPredicted RBP17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 DEPTORQ8TB45 409 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 TRIM9Q9C026 710 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 PRO3102Q9H379 93 aa17.11■□□□□ 0.33
RPUSD3-217ENST00000485705 MAGEF1Q9HAY2 307 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms