RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 CDCA2Q69YH5 1023 aaPredicted RBP5.1□□□□□ -1.59
VPS50-217ENST00000485140 KIAA1841Q6NSI8 718 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 Q8N1X5 172 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 ZNF808Q8N4W9 903 aaPredicted RBP5.1□□□□□ -1.59
VPS50-217ENST00000485140 EFHBQ8N7U6 833 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 PLA2G15Q8NCC3 412 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 APPBP2Q92624 585 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 PAWRQ96IZ0 340 aaKnown RBP5.1□□□□□ -1.59
VPS50-217ENST00000485140 PLEKHG4BQ96PX9 1271 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 PITHD1Q9GZP4 211 aaPredicted RBP5.1□□□□□ -1.59
VPS50-217ENST00000485140 RCAN3Q9UKA8 241 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 PLAAQ9Y263 795 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 HS3ST3A1Q9Y663 406 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 DNAJC8O75937 253 aaPredicted RBP5.09□□□□□ -1.59
VPS50-217ENST00000485140 JMJD7P0C870 316 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 PTGS2P35354 604 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 MAN2A2P49641 1150 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 INHBCP55103 352 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 BPIFB4P59827 614 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 DPTQ07507 201 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 ADCY2Q08462 1091 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 PABPC4Q13310 644 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS50-217ENST00000485140 TM4SF20Q53R12 229 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 METTL24Q5JXM2 366 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 FAM111BQ6SJ93 734 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 C16orf86Q6ZW13 317 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 KANSL1Q7Z3B3 1105 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 CLEC14AQ86T13 490 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 ZNF483Q8TF39 744 aaPredicted RBP5.09□□□□□ -1.59
VPS50-217ENST00000485140 CACTINQ8WUQ7 758 aaKnown RBP5.09□□□□□ -1.59
VPS50-217ENST00000485140 NKD2Q969F2 451 aaPredicted RBP5.09□□□□□ -1.59
VPS50-217ENST00000485140 IL23AQ9NPF7 189 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 CLCA2Q9UQC9 943 aa5.09□□□□□ -1.59
VPS50-217ENST00000485140 A0A0A6YYJ9 748 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 NPIPB8E9PQR5 432 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 ASMTLO95671 621 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 XPAP23025 273 aaPredicted RBP5.08□□□□□ -1.6
VPS50-217ENST00000485140 NPEPPSP55786 919 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 SQSTM1Q13501 440 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 FHL2Q14192 279 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 NOLC1Q14978 699 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS50-217ENST00000485140 DCAF17Q5H9S7 520 aaPredicted RBP5.08□□□□□ -1.6
VPS50-217ENST00000485140 ESPNLQ6ZVH7 1005 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 C11orf74Q86VG3 221 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 BCL6BQ8N143 479 aaPredicted RBP5.08□□□□□ -1.6
VPS50-217ENST00000485140 EXTL1Q92935 676 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 ARL8AQ96BM9 186 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 PDCD2LQ9BRP1 358 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 SCAND2PQ9GZW5 306 aaPredicted RBP5.08□□□□□ -1.6
VPS50-217ENST00000485140 KCNG1Q9UIX4 513 aa5.08□□□□□ -1.6
VPS50-217ENST00000485140 F2P00734 622 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 SLPIP03973 132 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 RGS3P49796 1198 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 WNT3AP56704 352 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 NRG3P56975 720 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 ATP2C1P98194 919 aaPredicted RBP5.07□□□□□ -1.6
VPS50-217ENST00000485140 FSTL4Q6MZW2 842 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 APBB1IPQ7Z5R6 666 aaPredicted RBP5.07□□□□□ -1.6
VPS50-217ENST00000485140 ZFPM1Q8IX07 1006 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 UNC5BQ8IZJ1 945 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 ANKRD53Q8N9V6 530 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 IL17DQ8TAD2 202 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 NINJ1Q92982 152 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 UIMC1Q96RL1 719 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 TOMM22Q9NS69 142 aa5.07□□□□□ -1.6
VPS50-217ENST00000485140 RBM8AQ9Y5S9 174 aaKnown RBP5.07□□□□□ -1.6
VPS50-217ENST00000485140 TMEM191CA6NGB0 347 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 GNAT2P19087 354 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 KIR2DL3P43628 341 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 SCNN1BP51168 640 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 PHC1P78364 1004 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 ELAVL1Q15717 326 aaKnown RBP5.06□□□□□ -1.6
VPS50-217ENST00000485140 FKBP15Q5T1M5 1219 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 IQSEC1Q6DN90 963 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 CMTM4Q8IZR5 234 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 CDYL2Q8N8U2 506 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 FERMT2Q96AC1 680 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 TMEM176AQ96HP8 235 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 CLUHP3Q96NS8 147 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 FEZ1Q99689 392 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 MTG2Q9H4K7 406 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 OXSMQ9NWU1 459 aa5.06□□□□□ -1.6
VPS50-217ENST00000485140 HECAQ9UBI9 543 aaPredicted RBP5.06□□□□□ -1.6
VPS50-217ENST00000485140 DVL2O14641 736 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 NARSO43776 548 aaKnown RBP5.05□□□□□ -1.6
VPS50-217ENST00000485140 OPHN1O60890 802 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 RECQL4O94761 1208 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 TOX4O94842 621 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 PRPF6O94906 941 aaKnown RBP5.05□□□□□ -1.6
VPS50-217ENST00000485140 LSP1P33241 339 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 NEK4P51957 841 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 KPNA1P52294 538 aaPredicted RBP5.05□□□□□ -1.6
VPS50-217ENST00000485140 INHBEP58166 350 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 SPIDRQ14159 915 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 RRP1BQ14684 758 aaKnown RBP5.05□□□□□ -1.6
VPS50-217ENST00000485140 CCDC144BQ3MJ40 725 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 NAIF1Q69YI7 327 aaPredicted RBP5.05□□□□□ -1.6
VPS50-217ENST00000485140 HTR3DQ70Z44 454 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 GAREM2Q75VX8 874 aa5.05□□□□□ -1.6
VPS50-217ENST00000485140 SYNE4Q8N205 404 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms