RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PBX3P40426 434 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 MTHFRP42898 656 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 POLGP54098 1239 aaPredicted RBP14.68□□□□□ -0.06
HDAC6-227ENST00000485102 EVCP57679 992 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 PRKCEQ02156 737 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 TBC1D8BQ0IIM8 1120 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 LLGL2Q6P1M3 1020 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 B3GNT9Q6UX72 402 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 TRMT1LQ7Z2T5 733 aaKnown RBP14.68□□□□□ -0.06
HDAC6-227ENST00000485102 KREMEN2Q8NCW0 462 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 POMKQ9H5K3 350 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 SH3GLB2Q9NR46 395 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 USTQ9Y2C2 406 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 MYO15AQ9UKN7 3530 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 CYP3A7-CYP3A51PA0A087WV96 503 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 GAS7O60861 476 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 PSMD10O75832 226 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 STBD1O95210 358 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 CXCL14O95715 111 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 SKIP12755 728 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 IFNAR1P17181 557 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 CYP3A7P24462 503 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 PHKA2P46019 1235 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 BCAR1P56945 870 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 FGD1P98174 961 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
HDAC6-227ENST00000485102 MTMR3Q13615 1198 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 Q4G0T1 1027 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 XKR3Q5GH77 459 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 Q6ZUG5 572 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 ZDHHC14Q8IZN3 488 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 HELQQ8TDG4 1101 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 TMEM169Q96HH4 297 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 GCOM2Q9BZD3 368 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-227ENST00000485102 C22orf23Q9BZE7 217 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 INO80BQ9C086 356 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-227ENST00000485102 DZANK1Q9NVP4 752 aa14.67□□□□□ -0.06
HDAC6-227ENST00000485102 C2CD4DB7Z1M9 353 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 CTSAP10619 480 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 UGCGQ16739 394 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 LRCH2Q5VUJ6 765 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 KIAA1841Q6NSI8 718 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 ZBTB33Q86T24 672 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 DDX53Q86TM3 631 aaKnown RBP14.66□□□□□ -0.06
HDAC6-227ENST00000485102 ZNF410Q86VK4 478 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 FAM177A1Q8N128 213 aaPredicted RBP14.66□□□□□ -0.06
HDAC6-227ENST00000485102 PLCD3Q8N3E9 789 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 NLRP7Q8WX94 980 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 BRF1Q92994 677 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 TEKT3Q9BXF9 490 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 ZBP1Q9H171 429 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 UNC45AQ9H3U1 944 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 STK39Q9UEW8 545 aa14.66□□□□□ -0.06
HDAC6-227ENST00000485102 SPTBN4Q9H254 2564 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 GALR2O43603 387 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-227ENST00000485102 CDC45O75419 566 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 BRD1O95696 1058 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 SFPQP23246 707 aaKnown RBP eCLIP14.65□□□□□ -0.06
HDAC6-227ENST00000485102 HSPA4P34932 840 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 DNM2P50570 870 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 DRP2Q13474 957 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 ATAT1Q5SQI0 421 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 BLOC1S2Q6QNY1 142 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 MOXD1Q6UVY6 613 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 VPS52Q8N1B4 723 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 RNF169Q8NCN4 708 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 SLC22A17Q8WUG5 538 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 PHKBQ93100 1093 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 IGSF21Q96ID5 467 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 MBOAT7Q96N66 472 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 SCLT1Q96NL6 688 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
HDAC6-227ENST00000485102 NAP1L2Q9ULW6 460 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-227ENST00000485102 NT5C1B-RDH14C9J2C7 533 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 GFRA3O60609 400 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 MAFO75444 373 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-227ENST00000485102 PDGFBP01127 241 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-227ENST00000485102 GALTP07902 379 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 CPA1P15085 419 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 FGFR4P22455 802 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 RAB27AP51159 221 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 GLB1LQ6UWU2 654 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 PPFIBP1Q86W92 1011 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 ATOH1Q92858 354 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-227ENST00000485102 ZNF668Q96K58 619 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-227ENST00000485102 JPH2Q9BR39 696 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-227ENST00000485102 NRDE2Q9H7Z3 1164 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 VPS54Q9P1Q0 977 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 CDH22Q9UJ99 828 aa14.64□□□□□ -0.07
HDAC6-227ENST00000485102 DMDP11532 3685 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 A0A087WZ62 844 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 M0R2N6 131 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 CSDE1O75534 798 aaKnown RBP14.63□□□□□ -0.07
HDAC6-227ENST00000485102 OFD1O75665 1012 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 RPS6KB1P23443 525 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 PDIA3P30101 505 aaKnown RBP14.63□□□□□ -0.07
HDAC6-227ENST00000485102 CLCN5P51795 746 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 NOMO2Q5JPE7 1267 aa14.63□□□□□ -0.07
HDAC6-227ENST00000485102 TWF2Q6IBS0 349 aaKnown RBP14.63□□□□□ -0.07
HDAC6-227ENST00000485102 MIER3Q7Z3K6 550 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms