RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 DDX46Q7L014 1031 aaKnown RBP5.29□□□□□ -1.56
VPS8-223ENST00000485024 LRRTM3Q86VH5 581 aa5.29□□□□□ -1.56
VPS8-223ENST00000485024 UHMK1Q8TAS1 419 aaKnown RBP5.29□□□□□ -1.56
VPS8-223ENST00000485024 OSBP2Q969R2 916 aa5.29□□□□□ -1.56
VPS8-223ENST00000485024 OR10A2Q9H208 303 aa5.29□□□□□ -1.56
VPS8-223ENST00000485024 SPATA31A6Q5VVP1 1343 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 A0A087X0B3 334 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 CAPNS1P04632 268 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 PDGFRBP09619 1106 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 MRE11P49959 708 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 EXOSC10Q01780 885 aaKnown RBP5.28□□□□□ -1.56
VPS8-223ENST00000485024 RIN1Q13671 783 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 GPR162Q16538 588 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 C21orf62-AS1Q17RA5 79 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 RSPO2Q6UXX9 243 aaPredicted RBP5.28□□□□□ -1.56
VPS8-223ENST00000485024 DPP8Q6V1X1 898 aaPredicted RBP5.28□□□□□ -1.56
VPS8-223ENST00000485024 UBE2R2Q712K3 238 aaPredicted RBP5.28□□□□□ -1.56
VPS8-223ENST00000485024 OTOP3Q7RTS5 596 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 ZNF276Q8N554 614 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 DCAF4Q8WV16 495 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 MAGEB10Q96LZ2 347 aaPredicted RBP5.28□□□□□ -1.56
VPS8-223ENST00000485024 ZFYVE21Q9BQ24 234 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 RNF7Q9UBF6 113 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 TESQ9UGI8 421 aaKnown RBP5.28□□□□□ -1.56
VPS8-223ENST00000485024 NDOR1Q9UHB4 597 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 TRPS1Q9UHF7 1281 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 FRMD4BQ9Y2L6 1034 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 HS3ST4Q9Y661 456 aa5.28□□□□□ -1.56
VPS8-223ENST00000485024 PMS2P1A4D2B8 440 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 GSG1L2A8MUP6 293 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 IKBKBO14920 756 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 OPA1O60313 960 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 POU3F2P20265 443 aaPredicted RBP5.27□□□□□ -1.57
VPS8-223ENST00000485024 IGFALSP35858 605 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 GFRA1P56159 465 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 IL13RA1P78552 427 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 SAFB2Q14151 953 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS8-223ENST00000485024 EIF4HQ15056 248 aaKnown RBP5.27□□□□□ -1.57
VPS8-223ENST00000485024 PTPAQ15257 358 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 PLEKHG6Q3KR16 790 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 HSP90AB2PQ58FF8 381 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 LY6G5CQ5SRR4 150 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 YOD1Q5VVQ6 348 aaPredicted RBP5.27□□□□□ -1.57
VPS8-223ENST00000485024 TRIM68Q6AZZ1 485 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 NOL8Q76FK4 1167 aaKnown RBP5.27□□□□□ -1.57
VPS8-223ENST00000485024 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.27□□□□□ -1.57
VPS8-223ENST00000485024 RNF180Q86T96 592 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 GSTCDQ8NEC7 633 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 ATL2Q8NHH9 583 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 CCDC136Q96JN2 1154 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 CDC42EP3Q9UKI2 254 aa5.27□□□□□ -1.57
VPS8-223ENST00000485024 KDM6BO15054 1643 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 ZNF185O15231 689 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 BRINP1O60477 761 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 DLX3O60479 287 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 ABHD16AO95870 558 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 FBXO42Q6P3S6 717 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 CNNM4Q6P4Q7 775 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 WASF1Q92558 559 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 MIEF2Q96C03 454 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 C1orf159Q96HA4 380 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 CLUHP3Q96NS8 147 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 FZD1Q9UP38 647 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 NPFFR2Q9Y5X5 522 aa5.26□□□□□ -1.57
VPS8-223ENST00000485024 COL3A1P02461 1466 aaPredicted RBP5.26□□□□□ -1.57
VPS8-223ENST00000485024 XDHP47989 1333 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 MYADML2A6NDP7 307 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 B3GALT2O43825 422 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 ITGB1P05556 798 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 C6orf222P0C671 652 aaPredicted RBP5.25□□□□□ -1.57
VPS8-223ENST00000485024 COL6A2P12110 1019 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 GRIA2P42262 883 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 NEK4P51957 841 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 DBPQ10586 325 aaPredicted RBP5.25□□□□□ -1.57
VPS8-223ENST00000485024 DHCR24Q15392 516 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 RABL3Q5HYI8 236 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 STYK1Q6J9G0 422 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 LRRC55Q6ZSA7 311 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 BRAPQ7Z569 592 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 NECAB2Q7Z6G3 386 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 DDX53Q86TM3 631 aaKnown RBP5.25□□□□□ -1.57
VPS8-223ENST00000485024 KIF18BQ86Y91 864 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 SYNE4Q8N205 404 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 TARS2Q9BW92 718 aaKnown RBP5.25□□□□□ -1.57
VPS8-223ENST00000485024 TRIM39Q9HCM9 518 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 ARHGEF17Q96PE2 2063 aaPredicted RBP5.25□□□□□ -1.57
VPS8-223ENST00000485024 MRC2Q9UBG0 1479 aa5.25□□□□□ -1.57
VPS8-223ENST00000485024 GSTA4O15217 222 aa5.24□□□□□ -1.57
VPS8-223ENST00000485024 NKRFO15226 690 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS8-223ENST00000485024 EPHA5P54756 1037 aa5.24□□□□□ -1.57
VPS8-223ENST00000485024 SART3Q15020 963 aaKnown RBP5.24□□□□□ -1.57
VPS8-223ENST00000485024 CFAP100Q494V2 611 aa5.24□□□□□ -1.57
VPS8-223ENST00000485024 ODR4Q5SWX8 454 aa5.24□□□□□ -1.57
VPS8-223ENST00000485024 SLC35F1Q5T1Q4 408 aa5.24□□□□□ -1.57
VPS8-223ENST00000485024 SP5Q6BEB4 398 aaPredicted RBP5.24□□□□□ -1.57
VPS8-223ENST00000485024 KCNV1Q6PIU1 500 aa5.24□□□□□ -1.57
VPS8-223ENST00000485024 USP53Q70EK8 1073 aa5.24□□□□□ -1.57
VPS8-223ENST00000485024 DDX42Q86XP3 938 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS8-223ENST00000485024 AFAP1L2Q8N4X5 818 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms