RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 MTHFD1LQ6UB35 978 aa22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 RNF180Q86T96 592 aa22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 METTL13Q8N6R0 699 aa22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 PCSK9Q8NBP7 692 aaKnown RBP22.53■■□□□ 1.2
VCPKMT-203ENST00000484763 HOXD13P35453 343 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 GTF2BQ00403 316 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 MKRN4PQ13434 485 aaPredicted RBP22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 MXD4Q14582 209 aaPredicted RBP22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 SLC9C1Q4G0N8 1177 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 ZCWPW2Q504Y3 356 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 TMEM161BQ8NDZ6 487 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 LMBR1Q8WVP7 490 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 HVCN1Q96D96 273 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 SCP2P22307 547 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 ABCD1P33897 745 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 CLCN3P51790 818 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 MARCH8Q5T0T0 291 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 CXCL17Q6UXB2 119 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 PPP4R3CPQ6ZMV5 832 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 CSGALNACT2Q8N6G5 542 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 LINC01465Q8N7H1 131 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 PRPF31Q8WWY3 499 aaKnown RBP22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 DUSP9Q99956 384 aaKnown RBP22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 KIFC3Q9BVG8 833 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 SAMSN1Q9NSI8 373 aaKnown RBP22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 SETD4Q9NVD3 440 aa22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 SUCLA2Q9P2R7 463 aaPredicted RBP22.52■■□□□ 1.2
VCPKMT-203ENST00000484763 SIP14410 1827 aa22.52■■□□□ 1.19
VCPKMT-203ENST00000484763 ZMYM2Q9UBW7 1377 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 MYCNP04198 464 aaPredicted RBP22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 ASGR1P07306 291 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 TMOD1P28289 359 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 PLCB2Q00722 1185 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 KCNA1Q09470 495 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 KCNA10Q16322 511 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 LHX8Q68G74 356 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 CCSAPQ6IQ19 270 aaPredicted RBP22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 NOC3LQ8WTT2 800 aaKnown RBP22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 ZBTB10Q96DT7 871 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 TMEM206Q9H813 350 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 TYW1Q9NV66 732 aaKnown RBP22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 ARHGAP28Q9P2N2 729 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 ADGRA3Q8IWK6 1321 aa22.51■■□□□ 1.19
VCPKMT-203ENST00000484763 LRRIQ4A6NIV6 560 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 PDXKO00764 312 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 ZNF18P17022 549 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 CAPSQ13938 189 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 KSR1Q8IVT5 923 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 C7orf31Q8N865 590 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 ACCSQ96QU6 501 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 THAP9Q9H5L6 903 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 TRAF3IP3Q9Y228 551 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 DENND3A2RUS2 1198 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 LAMTOR4Q0VGL1 99 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 EDRF1Q3B7T1 1238 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 CDKAL1Q5VV42 579 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 NFRKBQ6P4R8 1299 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 CTU1Q7Z7A3 348 aaKnown RBP22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 DEPTORQ8TB45 409 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 ANP32BQ92688 251 aaKnown RBP22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 KCNN1Q92952 543 aa22.5■■□□□ 1.19
VCPKMT-203ENST00000484763 MBLAC1A4D2B0 266 aaPredicted RBP22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 ASAP2O43150 1006 aa22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 CALUO43852 315 aaPredicted RBP22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 ATP1A3P13637 1013 aa22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 HSP90AA4PQ58FG1 418 aa22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 SARM1Q6SZW1 724 aa22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 RHPN2Q8IUC4 686 aa22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 SRRTQ9BXP5 876 aaKnown RBP22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 TBX20Q9UMR3 447 aa22.49■■□□□ 1.19
VCPKMT-203ENST00000484763 C17orf102A2RUQ5 167 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 FGFR1OPO95684 399 aaKnown RBP22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 GNAT1P11488 350 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 HOXC8P31273 242 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 TFDP1Q14186 410 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 MAP4K3Q8IVH8 894 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 SYCP3Q8IZU3 236 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 MAP7D2Q96T17 732 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 GBP3Q9H0R5 595 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 UNC93B1Q9H1C4 597 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 HDAC6Q9UBN7 1215 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 EXOC7Q9UPT5 735 aa22.48■■□□□ 1.19
VCPKMT-203ENST00000484763 TGFB1I1O43294 461 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 CDK11BP21127 795 aaKnown RBP22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 ADAM17P78536 824 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 FKBP3Q00688 224 aaKnown RBP22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 HS2ST1Q7LGA3 356 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 GOLGA5Q8TBA6 731 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 PPP1R13LQ8WUF5 828 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 AKT3Q9Y243 479 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 MOXD2PA6NHM9 499 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 AP5Z1O43299 807 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 CABYRO75952 493 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 CTCFP49711 727 aaPredicted RBP22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 SPAG1Q07617 926 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 NBPF20Q3BBV1 942 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 CDCA2Q69YH5 1023 aaPredicted RBP22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 LRRC55Q6ZSA7 311 aa22.47■■□□□ 1.19
VCPKMT-203ENST00000484763 FAM114A1Q8IWE2 563 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms