RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 LONRF3Q496Y0 759 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 ZNF484Q5JVG2 852 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 TRMT1LQ7Z2T5 733 aaKnown RBP20.47■□□□□ 0.87
DDR1-245ENST00000484556 STAMQ92783 540 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 MXRA8Q9BRK3 442 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 EMILIN2Q9BXX0 1053 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 PSTPIP2Q9H939 334 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 FBXO4Q9UKT5 387 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 PCDHA6Q9UN73 950 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 PCDHGA2Q9Y5H1 932 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 PCDHA8Q9Y5H6 950 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 FAM208BQ5VWN6 2430 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 IGKV6D-21A0A0A0MT36 114 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 A0A0U1RQF3 1178 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 CCDC195A0A1B0GUA6 201 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 ATG7O95352 703 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 HOXB3P14651 431 aaPredicted RBP20.46■□□□□ 0.87
DDR1-245ENST00000484556 KCNA4P22459 653 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 LPPQ93052 612 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 GBP3Q9H0R5 595 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 EPC1Q9H2F5 836 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 NRDE2Q9H7Z3 1164 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 SEC63Q9UGP8 760 aaKnown RBP20.46■□□□□ 0.87
DDR1-245ENST00000484556 AKT3Q9Y243 479 aa20.46■□□□□ 0.87
DDR1-245ENST00000484556 INPPL1O15357 1258 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 RFPL2O75678 378 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 GALTP07902 379 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 ATP4AP20648 1035 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 FAM160B1Q5W0V3 765 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 PDXDC2PQ6P474 469 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 GET4Q7L5D6 327 aaPredicted RBP20.45■□□□□ 0.86
DDR1-245ENST00000484556 BCO2Q9BYV7 579 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 ZNF302Q9NR11 478 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 DNAJB4Q9UDY4 337 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 INPP5FQ9Y2H2 1132 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 NUMBLQ9Y6R0 609 aa20.45■□□□□ 0.86
DDR1-245ENST00000484556 B4GALT3O60512 393 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 SLC11A1P49279 550 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 STARD6P59095 220 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 HTR4Q13639 388 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 TSSK4Q6SA08 328 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 ABHD15Q6UXT9 468 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 ZBTB44Q8NCP5 570 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 CMASQ8NFW8 434 aaPredicted RBP20.44■□□□□ 0.86
DDR1-245ENST00000484556 NXPE3Q969Y0 559 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 MYL10Q9BUA6 226 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 SPZ1Q9BXG8 430 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 ADAMTS10Q9H324 1103 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 AGO4Q9HCK5 861 aaKnown RBP20.44■□□□□ 0.86
DDR1-245ENST00000484556 SLC2A4RGQ9NR83 387 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 TBC1D13Q9NVG8 400 aa20.44■□□□□ 0.86
DDR1-245ENST00000484556 MTF2Q9Y483 593 aaPredicted RBP20.44■□□□□ 0.86
DDR1-245ENST00000484556 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.44■□□□□ 0.86
DDR1-245ENST00000484556 MYH9P35579 1960 aaKnown RBP20.43■□□□□ 0.86
DDR1-245ENST00000484556 ERICH2A1L162 156 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 C2CD2LO14523 706 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 EIF4BP23588 611 aaKnown RBP20.43■□□□□ 0.86
DDR1-245ENST00000484556 SNW1Q13573 536 aaKnown RBP20.43■□□□□ 0.86
DDR1-245ENST00000484556 CATIPQ7Z7H3 387 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 CKAP2LQ8IYA6 745 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 LRRC71Q8N4P6 559 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 BBXQ8WY36 941 aaPredicted RBP20.43■□□□□ 0.86
DDR1-245ENST00000484556 SMG7Q92540 1137 aaKnown RBP20.43■□□□□ 0.86
DDR1-245ENST00000484556 PGBD1Q96JS3 809 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 DIAPH3Q9NSV4 1193 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 ZSCAN32Q9NX65 697 aa20.43■□□□□ 0.86
DDR1-245ENST00000484556 hCG_1642624A0A1W2PR95 340 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 KANSL1LA0AUZ9 987 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 MEIS3P2A8K0S8 358 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 CSDE1O75534 798 aaKnown RBP20.42■□□□□ 0.86
DDR1-245ENST00000484556 LAMP2P13473 410 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 KIF5BP33176 963 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 DMWDQ09019 674 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 SPEM2Q0P670 501 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 UBXN2BQ14CS0 331 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 SWSAP1Q6NVH7 229 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 CMTR1Q8N1G2 835 aaKnown RBP20.42■□□□□ 0.86
DDR1-245ENST00000484556 SHDQ96IW2 340 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 RPP25Q9BUL9 199 aaKnown RBP20.42■□□□□ 0.86
DDR1-245ENST00000484556 GMEB2Q9UKD1 530 aa20.42■□□□□ 0.86
DDR1-245ENST00000484556 ANHXE9PGG2 379 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 LILRB3O75022 631 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 LILRB5O75023 590 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 PLEKHA8P1O95397 391 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 GPC5P78333 572 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 RNASELQ05823 741 aaKnown RBP20.41■□□□□ 0.86
DDR1-245ENST00000484556 TRDNQ13061 729 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 LPAL2Q16609 132 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 ZNF707Q96C28 371 aaPredicted RBP20.41■□□□□ 0.86
DDR1-245ENST00000484556 BORCS6Q96GS4 357 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 SCLT1Q96NL6 688 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 MAP7D2Q96T17 732 aa20.41■□□□□ 0.86
DDR1-245ENST00000484556 SH2B1Q9NRF2 756 aaPredicted RBP20.41■□□□□ 0.86
DDR1-245ENST00000484556 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.4■□□□□ 0.86
DDR1-245ENST00000484556 SLC30A4O14863 429 aa20.4■□□□□ 0.86
DDR1-245ENST00000484556 NOMO2Q5JPE7 1267 aa20.4■□□□□ 0.86
DDR1-245ENST00000484556 FRYQ5TBA9 3013 aa20.4■□□□□ 0.86
DDR1-245ENST00000484556 EFCAB12Q6NXP0 572 aa20.4■□□□□ 0.86
DDR1-245ENST00000484556 ZNF280BQ86YH2 543 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms