RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 STK25O00506 426 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 B4GALT3O60512 393 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 DARSP14868 501 aaKnown RBP12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 ZNF76P36508 570 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 BMS1Q14692 1282 aaKnown RBP12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 LETM2Q2VYF4 491 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 NIPA1Q7RTP0 329 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 PLA2G4DQ86XP0 818 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 FANCBQ8NB91 859 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 CNTNAP3BQ96NU0 1288 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 MAP7D2Q96T17 732 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 MRPL9Q9BYD2 267 aaKnown RBP12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 LRRC2Q9BYS8 371 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 NRDE2Q9H7Z3 1164 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 DNAJB4Q9UDY4 337 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 ACACBO00763 2458 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 CNTNAP5Q8WYK1 1306 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 WDR81Q562E7 1941 aa12.33□□□□□ -0.44
SMARCC1-205ENST00000483847 FANCMQ8IYD8 2048 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 SPTBN2O15020 2390 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 ADAMTS3O15072 1205 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 SGSM2O43147 1006 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 SSBP05455 408 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 GALTP07902 379 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 CALM1P0DP23 149 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 CALM2P0DP24 149 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 CALM3P0DP25 149 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 GPC3P51654 580 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 CLCN4P51793 760 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 ADCY7P51828 1080 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 GIT2Q14161 759 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 PUM1Q14671 1186 aaKnown RBP eCLIP12.32□□□□□ -0.445e-7■□□□□ 10.1
SMARCC1-205ENST00000483847 SPECC1Q5M775 1068 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 TTC22Q5TAA0 569 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 MICU3Q86XE3 530 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 CRYGNQ8WXF5 182 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 MAP4K1Q92918 833 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 KLHL5Q96PQ7 755 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 TBC1D17Q9HA65 648 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 IGSF9Q9P2J2 1179 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 GABBR1Q9UBS5 961 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 WNT16Q9UBV4 365 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 CA14Q9ULX7 337 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 RBM8AQ9Y5S9 174 aaKnown RBP12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 SLC12A7Q9Y666 1083 aa12.32□□□□□ -0.44
SMARCC1-205ENST00000483847 SMCO2A6NFE2 343 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 MAGEB2O15479 319 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 ZNF862O60290 1169 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 DCNP07585 359 aaKnown RBP12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 CNPP09543 421 aaKnown RBP12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 KLRC2P26717 231 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 MCM5P33992 734 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 LIFRP42702 1097 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 PHKA2P46019 1235 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 SLC11A1P49279 550 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 DRP2Q13474 957 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 ZNF746Q6NUN9 644 aaPredicted RBP12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 PPFIBP1Q86W92 1011 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 TMTC2Q8N394 836 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 TMEM87BQ96K49 555 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 SCLT1Q96NL6 688 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 ZNF577Q9BSK1 485 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 MTA3Q9BTC8 594 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 GBP3Q9H0R5 595 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 DACT1Q9NYF0 836 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 DLGAP2Q9P1A6 1054 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 CEP131Q9UPN4 1083 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 INPP5FQ9Y2H2 1132 aa12.31□□□□□ -0.44
SMARCC1-205ENST00000483847 POTEMA6NI47 508 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 LILRB3O75022 631 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 PSAPP07602 524 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 SP9P0CG40 484 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 MYBP10242 640 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 RFX1P22670 979 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 TMOD1P28289 359 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 FUT2Q10981 343 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 UGCGQ16739 394 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 JAKMIP3Q5VZ66 844 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 PPP1R18Q6NYC8 613 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 ZNF280BQ86YH2 543 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 SLC44A3Q8N4M1 653 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 ST13P5Q8NFI4 369 aaPredicted RBP12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 GPR152Q8TDT2 470 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 NLRP7Q8WX94 980 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 RUBCNQ92622 972 aa12.3□□□□□ -0.44
SMARCC1-205ENST00000483847 MYADMQ96S97 322 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms