RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CACNA2D4Q7Z3S7 1137 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 FAM186BQ8IYM0 893 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 DRC1Q96MC2 740 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 CYP26B1Q9NR63 512 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 SEPT9Q9UHD8 586 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 AJAP1Q9UKB5 411 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 V9GYY5 206 aaPredicted RBP9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 UBE4BO95155 1302 aa9.68□□□□□ -0.86
CDC42SE1-204ENST00000483763 CCDC169A6NNP5 214 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 LRRN2O75325 713 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 TFRCP02786 760 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 HSPA1AP0DMV8 641 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 HSPA1BP0DMV9 641 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 NCKAP1LP55160 1127 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 FKBP1BP68106 108 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ASTE1Q2TB18 679 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 HSDL1Q3SXM5 330 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ARHGAP29Q52LW3 1261 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 COL13A1Q5TAT6 717 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 GJB7Q6PEY0 223 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 METTL14Q9HCE5 456 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 SIX2Q9NPC8 291 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ZNHIT6Q9NWK9 470 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 CEP72Q9P209 647 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 USP20Q9Y2K6 914 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 IGKV6D-21A0A0A0MT36 114 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 BTBD19C9JJ37 291 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ANKRD63C9JTQ0 380 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 EXOC3O60645 756 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 URI1O94763 535 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 SLC25A27O95847 323 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 TUBB4AP04350 444 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 MAPTP10636 758 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 UCHL3P15374 230 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 EIF4A3P38919 411 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ARID5AQ03989 594 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 EXOC3L4Q17RC7 722 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 MTERF2Q49AM1 385 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ZNF569Q5MCW4 686 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 MIS18BP1Q6P0N0 1132 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 STXBP4Q6ZWJ1 553 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 OTUD6AQ7L8S5 288 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 SLC9A9Q8IVB4 645 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ANKRD13CQ8N6S4 541 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 CCDC42Q96M95 316 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 CEP89Q96ST8 783 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 NTPCRQ9BSD7 190 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 ST6GALNAC4Q9H4F1 302 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 TBX20Q9UMR3 447 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 GUCA1BQ9UMX6 200 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 FHOD1Q9Y613 1164 aa9.67□□□□□ -0.86
CDC42SE1-204ENST00000483763 MKI67P46013 3256 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 CCL15-CCL14A0A0B4J2E2 113 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 DENND3A2RUS2 1198 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 FAM155AB1AL88 458 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 EIF3CLB5ME19 914 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 PDHXO00330 501 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 DGAT1O75907 488 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 GGPS1O95749 300 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 PNMA6AP0CW24 399 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 GFPT1Q06210 699 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 NCBP1Q09161 790 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 KCTD2Q14681 263 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 CCL15Q16663 113 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 KLHDC7AQ5VTJ3 777 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 SLC39A4Q6P5W5 647 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 TAS1R3Q7RTX0 852 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 FBXO16Q8IX29 292 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 CCDC170Q8IYT3 715 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 PLEKHO2Q8TD55 490 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 BRI3BPQ8WY22 251 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 TMEM143Q96AN5 459 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 IQCDQ96DY2 449 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 MMP19Q99542 508 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 EIF3CQ99613 913 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 PTPN18Q99952 460 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 MKNK1Q9BUB5 465 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 ZNF302Q9NR11 478 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 PDGFCQ9NRA1 345 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 GCNT4Q9P109 453 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 DDX41Q9UJV9 622 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 LOXHD1Q8IVV2 1947 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 GOLGA8IPA6NC78 632 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 UNCXA6NJT0 531 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 GOLGA8JA6NMD2 632 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 KIF5CO60282 957 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 CNGA1P29973 690 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 CASQ1P31415 396 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 FMO5P49326 533 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 KIF11P52732 1056 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 DMP1Q13316 513 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 MAPK8IP2Q13387 824 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 ENOX2Q16206 610 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 XKR3Q5GH77 459 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 C1orf220Q5T0J3 134 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 RGMBQ6NW40 437 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 TRIM50Q86XT4 487 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 SLC35F6Q8N357 371 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms