RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 PTGIRP43119 386 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 POLE2P56282 527 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 COASYQ13057 564 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 MPP2Q14168 576 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 SYCE1Q8N0S2 351 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 FAM13CQ8NE31 585 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 ASAP3Q8TDY4 903 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 U2AF1L4Q8WU68 220 aaKnown RBP12.74□□□□□ -0.37
VTI1A-205ENST00000483122 CKAP2Q8WWK9 683 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 RAD54LQ92698 747 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 C18orf8Q96DM3 657 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 CDK5RAP3Q96JB5 506 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
VTI1A-205ENST00000483122 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 PCMTD2Q9NV79 361 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 TSPY2A6NKD2 308 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 DDX3XO00571 662 aaKnown RBP eCLIP12.74□□□□□ -0.372e-9■■□□□ 14.2
VTI1A-205ENST00000483122 AFPP02771 609 aaKnown RBP12.74□□□□□ -0.37
VTI1A-205ENST00000483122 KRT13P13646 458 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 EPS15P42566 896 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 RANBP1P43487 201 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 MAPK7Q13164 816 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 CMPK2Q5EBM0 449 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 ARHGAP22Q7Z5H3 698 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 DNAJC10Q8IXB1 793 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 PIGBQ92521 554 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 ARHGEF2Q92974 986 aaKnown RBP12.74□□□□□ -0.37
VTI1A-205ENST00000483122 NUDCD1Q96RS6 583 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 STMN4Q9H169 189 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-205ENST00000483122 KCNK9Q9NPC2 374 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 BARHL2Q9NY43 387 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 STK17AQ9UEE5 414 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 LRP5O75197 1615 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
VTI1A-205ENST00000483122 A0A1B0GUL6 1792 aa12.74□□□□□ -0.37
VTI1A-205ENST00000483122 POTEMA6NI47 508 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 UCHL3P15374 230 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 ACADSP16219 412 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 PTDSS1P48651 473 aaKnown RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 GALCP54803 685 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 NONOQ15233 471 aaKnown RBP eCLIP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 RNF43Q68DV7 783 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 OR52E8Q6IFG1 317 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 DNAJC9Q8WXX5 260 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 KIFAP3Q92845 792 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 TGS1Q96RS0 853 aaKnown RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 CPVLQ9H3G5 476 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 KLHL14Q9P2G3 628 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 PFASO15067 1338 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 IGSF9BQ9UPX0 1349 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 A0A0A6YYK5 440 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 ANKRD63C9JTQ0 380 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 E7ENQ6 273 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 SMAPO00193 183 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 KCNQ2O43526 872 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 LGR5O75473 907 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 PCP11498 1178 aaKnown RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 PLCG2P16885 1265 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 PARP6Q2NL67 630 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 MFSD5Q6N075 450 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 NEK8Q86SG6 692 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 CROCCP2Q86T23 111 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 APLFQ8IW19 511 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-205ENST00000483122 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 CEP63Q96MT8 703 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 CTNNAL1Q9UBT7 734 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 HAO1Q9UJM8 370 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 ANKRD36CQ5JPF3 1778 aa12.73□□□□□ -0.37
VTI1A-205ENST00000483122 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 DRG2P55039 364 aaKnown RBP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 CUL3Q13618 768 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 ECM1Q16610 540 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 CCDC25Q86WR0 208 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 FAM136AQ96C01 138 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 DNAJC19Q96DA6 116 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 LRMDAQ9H2I8 198 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 TXLNGQ9NUQ3 528 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 G3BP2Q9UN86 482 aaKnown RBP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 BZW2Q9Y6E2 419 aaKnown RBP12.72□□□□□ -0.37
VTI1A-205ENST00000483122 PYGBP11216 843 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 PRKCIP41743 596 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 NPEPPSP55786 919 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 TSNAXIP1Q2TAA8 658 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 FAM26FQ5R3K3 315 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 GALNT17Q6IS24 598 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 GJB7Q6PEY0 223 aa12.72□□□□□ -0.37
VTI1A-205ENST00000483122 FOXR2Q6PJQ5 311 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms