RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 PSMC5P62195 406 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 KRT17Q04695 432 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 DUSP6Q16828 381 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 RHPN2Q8IUC4 686 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 VN1R2Q8NFZ6 395 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 HELQQ8TDG4 1101 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 CDCA3Q99618 268 aaPredicted RBP18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 PHF20Q9BVI0 1012 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 GJB4Q9NTQ9 266 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 SPG21Q9NZD8 308 aa18.61■□□□□ 0.57
RAB11FIP3-209ENST00000483002 MAFO75444 373 aaPredicted RBP18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 XBP1P17861 261 aa18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 PLA2G4FQ68DD2 849 aa18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 ANO5Q75V66 913 aa18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 ZNF598Q86UK7 904 aaKnown RBP18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 KSR1Q8IVT5 923 aa18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 CHST12Q9NRB3 414 aa18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 TPCN1Q9ULQ1 816 aa18.6■□□□□ 0.57
RAB11FIP3-209ENST00000483002 HIDE1A8MVS5 230 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 MARCH6O60337 910 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 CCNT1O60563 726 aaKnown RBP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 NEFLP07196 543 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 ATF7P17544 494 aaPredicted RBP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 SFPQP23246 707 aaKnown RBP eCLIP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 PPM1AP35813 382 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 QARSP47897 775 aaKnown RBP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 LONRF3Q496Y0 759 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 HERC4Q5GLZ8 1057 aaPredicted RBP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 TWF2Q6IBS0 349 aaKnown RBP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 LLGL2Q6P1M3 1020 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 PIK3AP1Q6ZUJ8 805 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 NEK8Q86SG6 692 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 OXER1Q8TDS5 423 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 FAM20AQ96MK3 541 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 NLRP4Q96MN2 994 aa18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 INO80BQ9C086 356 aaPredicted RBP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 NGRNQ9NPE2 291 aaKnown RBP18.59■□□□□ 0.57
RAB11FIP3-209ENST00000483002 FSD2A1L4K1 749 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 NT5C1B-RDH14C9J2C7 533 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 PFKFB2O60825 505 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 TECP42680 631 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 PHKA2P46019 1235 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 ALDH7A1P49419 539 aaKnown RBP18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 NPEPPSP55786 919 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 PPP2R5CQ13362 524 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 PPP4R3AQ6IN85 833 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 CATSPER4Q7RTX7 472 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 ZNF410Q86VK4 478 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 RPGRIP1Q96KN7 1286 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 JPH2Q9BR39 696 aaPredicted RBP18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 APOL5Q9BWW9 433 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 KCNMB3Q9NPA1 279 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 CYP26B1Q9NR63 512 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 VAV3Q9UKW4 847 aa18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 PIN4Q9Y237 131 aaKnown RBP18.58■□□□□ 0.56
RAB11FIP3-209ENST00000483002 LOC730098B7Z3J9 87 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 DKC1O60832 514 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 P4HBP07237 508 aaKnown RBP18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SRGAP2BP0DMP2 458 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 GCFC2P16383 781 aaKnown RBP18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 BCAR1P56945 870 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 TMEM184AQ6ZMB5 413 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 HFE2Q6ZVN8 426 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SLC39A11Q8N1S5 342 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 ZNF579Q8NAF0 562 aaKnown RBP18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 LPPQ93052 612 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 CEP170P1Q96L14 293 aa18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 PHF7Q9BWX1 381 aaPredicted RBP18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 MRPL9Q9BYD2 267 aaKnown RBP18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 ORC3Q9UBD5 711 aaPredicted RBP18.57■□□□□ 0.56
RAB11FIP3-209ENST00000483002 STK36Q9NRP7 1315 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 CTDNEP1O95476 244 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 CA8P35219 290 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 KCNC3Q14003 757 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 ANKRD54Q6NXT1 300 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 MRPL43Q8N983 215 aaKnown RBP18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SLC7A3Q8WY07 619 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 EDAQ92838 391 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 HAS1Q92839 578 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 TRAIPQ9BWF2 469 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 S1PR5Q9H228 398 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 WRAP73Q9P2S5 460 aaPredicted RBP18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 TECTAO75443 2155 aa18.56■□□□□ 0.56
RAB11FIP3-209ENST00000483002 ZC3H11AO75152 810 aaKnown RBP eCLIP18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SRGAP2CP0DJJ0 459 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SKIP12755 728 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 POLGP54098 1239 aaPredicted RBP18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 AK2P54819 239 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SMC1AQ14683 1233 aaKnown RBP18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 EARS2Q5JPH6 523 aaKnown RBP18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 NCAPH2Q6IBW4 605 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SYCE2Q6PIF2 218 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 PRPF31Q8WWY3 499 aaKnown RBP18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 SUSD6Q92537 303 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 TMEM143Q96AN5 459 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 NAP1L4Q99733 375 aaKnown RBP18.55■□□□□ 0.56
RAB11FIP3-209ENST00000483002 IFT122Q9HBG6 1241 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms