RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 GJB5O95377 273 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 SSBP05455 408 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNX4-205ENST00000482965 MYOGP15173 224 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 CYP11B2P19099 503 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 IBSPP21815 317 aaPredicted RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 FGFR4P22455 802 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 SFPQP23246 707 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNX4-205ENST00000482965 ARL2P36404 184 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 PHKA2P46019 1235 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 GRB10Q13322 594 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 TFDP1Q14186 410 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 MXD4Q14582 209 aaPredicted RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 SLC39A14Q15043 492 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 HYIQ5T013 277 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 FAM102BQ5T8I3 360 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 FAM43BQ6ZT52 329 aaPredicted RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 Q7L0L9 218 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 KCTD17Q8N5Z5 321 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 RNF149Q8NC42 400 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 ASAP3Q8TDY4 903 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 LINC01599Q8WXQ3 324 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 PNMA5Q96PV4 448 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 ADAM2Q99965 735 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 CSRNP2Q9H175 543 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 GPRC5CQ9NQ84 441 aa9.74□□□□□ -0.85
SNX4-205ENST00000482965 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 FBXO2Q9UK22 296 aaPredicted RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 YBX2Q9Y2T7 364 aaKnown RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 SRPRBQ9Y5M8 271 aaKnown RBP9.74□□□□□ -0.85
SNX4-205ENST00000482965 C19orf67A6NJJ6 358 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 SPTLC2O15270 562 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 MGEA5O60502 916 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 YEATS4O95619 227 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 BRD1O95696 1058 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 CA3P07451 260 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 ZSCAN20P17040 1043 aaPredicted RBP9.73□□□□□ -0.85
SNX4-205ENST00000482965 GLRA2P23416 452 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 TXLNAP40222 546 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 KARSQ15046 597 aaKnown RBP9.73□□□□□ -0.85
SNX4-205ENST00000482965 TMEM119Q4V9L6 283 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 SPECC1Q5M775 1068 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 PPP2R2DQ66LE6 453 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 ATL3Q6DD88 541 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 CATSPER4Q7RTX7 472 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 KCNK18Q7Z418 384 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 SRGAP1Q7Z6B7 1085 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 RTN4RL1Q86UN2 441 aaPredicted RBP9.73□□□□□ -0.85
SNX4-205ENST00000482965 DEFB123Q8N688 67 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 KRI1Q8N9T8 703 aaKnown RBP9.73□□□□□ -0.85
SNX4-205ENST00000482965 LINC00301Q8NCQ3 95 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 TOP1MTQ969P6 601 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 FAM161BQ96MY7 647 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 CLIC6Q96NY7 704 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 YME1L1Q96TA2 773 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 RAD9AQ99638 391 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 CCSER1Q9C0I3 900 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 SLC28A3Q9HAS3 691 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 C1orf112Q9NSG2 853 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 LRFN2Q9ULH4 789 aa9.73□□□□□ -0.85
SNX4-205ENST00000482965 MORC2Q9Y6X9 1032 aaPredicted RBP9.73□□□□□ -0.85
SNX4-205ENST00000482965 NLRC5Q86WI3 1866 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 LRRIQ4A6NIV6 560 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 INO80B-WBP1J3KQ70 363 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 PPP6R2O75170 966 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 PLA2G4BP0C869 781 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 STAG3L1P0CL83 205 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 PLCG1P19174 1290 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 SARSP49591 514 aaKnown RBP9.72□□□□□ -0.85
SNX4-205ENST00000482965 PTENP60484 403 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 DNM1Q05193 864 aaKnown RBP9.72□□□□□ -0.85
SNX4-205ENST00000482965 CAPSQ13938 189 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 DSC3Q14574 896 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 RINT1Q6NUQ1 792 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 SLC24A5Q71RS6 500 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 NPAS4Q8IUM7 802 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 SYMPKQ92797 1274 aaKnown RBP9.72□□□□□ -0.85
SNX4-205ENST00000482965 KIFAP3Q92845 792 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 EPSTI1Q96J88 318 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 IFT74Q96LB3 600 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 RUSC1Q9BVN2 902 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 TTYH1Q9H313 450 aaPredicted RBP9.72□□□□□ -0.85
SNX4-205ENST00000482965 SEMA6BQ9H3T3 888 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 ZNF576Q9H609 170 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 RTN4Q9NQC3 1192 aaKnown RBP9.72□□□□□ -0.85
SNX4-205ENST00000482965 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 CCDC39Q9UFE4 941 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 CFAP45Q9UL16 551 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 PIN4Q9Y237 131 aaKnown RBP9.72□□□□□ -0.85
SNX4-205ENST00000482965 ZDHHC9Q9Y397 364 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 INSL6Q9Y581 213 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 PCDHB7Q9Y5E2 793 aa9.72□□□□□ -0.85
SNX4-205ENST00000482965 FNDC1Q4ZHG4 1894 aaPredicted RBP9.71□□□□□ -0.85
SNX4-205ENST00000482965 LCHNA4D1U4 455 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 C9IYK1 514 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 ERLIN2O94905 339 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 NCLP19338 710 aaKnown RBP9.71□□□□□ -0.86
SNX4-205ENST00000482965 HTRA4P83105 476 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms