RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 TFDP1Q14186 410 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 KCNB1Q14721 858 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 RPAINQ86UA6 219 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 RNF149Q8NC42 400 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 SPATA20Q8TB22 786 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 DHX38Q92620 1227 aaKnown RBP13.52□□□□□ -0.25
SDC1-206ENST00000482879 ZNF668Q96K58 619 aaPredicted RBP13.52□□□□□ -0.25
SDC1-206ENST00000482879 NLRP4Q96MN2 994 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 SCLT1Q96NL6 688 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 KMT5AQ9NQR1 393 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 RMND1Q9NWS8 449 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 TBC1D7Q9P0N9 293 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 KCNG1Q9UIX4 513 aa13.52□□□□□ -0.25
SDC1-206ENST00000482879 LRRIQ4A6NIV6 560 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 M0QZ92 97 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 BIN1O00499 593 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 SLC16A4O15374 487 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 GPR32O75388 356 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 NAMPTP43490 491 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 NPTX2P47972 431 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 GPC3P51654 580 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 MRPS6P82932 125 aaKnown RBP13.51□□□□□ -0.25
SDC1-206ENST00000482879 FAAP100Q0VG06 881 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 PSMD2Q13200 908 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 CAPSQ13938 189 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 KIZQ2M2Z5 673 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 TRIM71Q2Q1W2 868 aaKnown RBP13.51□□□□□ -0.25
SDC1-206ENST00000482879 FAM26FQ5R3K3 315 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 NT5DC1Q5TFE4 455 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 FAM178BQ8IXR5 827 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 ZNF710Q8N1W2 664 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 CCDC155Q8N6L0 562 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 DEPTORQ8TB45 409 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 SPIRE2Q8WWL2 714 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 NLRP7Q8WX94 980 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 ADAMTS10Q9H324 1103 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
SDC1-206ENST00000482879 MAN1B1Q9UKM7 699 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 GINS2Q9Y248 185 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 DNAH12Q6ZR08 3092 aa13.51□□□□□ -0.25
SDC1-206ENST00000482879 A0A087WZ62 844 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 CAND2O75155 1236 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
SDC1-206ENST00000482879 CTSHP09668 335 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 MAPTP10636 758 aaKnown RBP13.5□□□□□ -0.25
SDC1-206ENST00000482879 CKBP12277 381 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 NMT1P30419 496 aaKnown RBP13.5□□□□□ -0.25
SDC1-206ENST00000482879 POU5F1BQ06416 359 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 EHHADHQ08426 723 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 BFSP2Q13515 415 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
SDC1-206ENST00000482879 ZNF410Q86VK4 478 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 SLC17A8Q8NDX2 589 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 CAGE1Q8TC20 777 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 FDXACB1Q9BRP7 624 aaPredicted RBP13.5□□□□□ -0.25
SDC1-206ENST00000482879 NTPCRQ9BSD7 190 aaKnown RBP13.5□□□□□ -0.25
SDC1-206ENST00000482879 KIFC3Q9BVG8 833 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 CELF4Q9BZC1 486 aaKnown RBP13.5□□□□□ -0.25
SDC1-206ENST00000482879 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 SLC39A2Q9NP94 309 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 OLFML3Q9NRN5 406 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 TMEM39AQ9NV64 488 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 TRPV2Q9Y5S1 764 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 CDY2AQ9Y6F7 541 aa13.5□□□□□ -0.25
SDC1-206ENST00000482879 H0YCG3 227 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 K7ENM7 598 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 GCNT3O95395 438 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 CHRNA1P02708 482 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 CLTBP09497 229 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 PHKA2P46019 1235 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 CRYBB1P53674 252 aaPredicted RBP13.49□□□□□ -0.25
SDC1-206ENST00000482879 NCKAP1LP55160 1127 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 PTENP60484 403 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 STK4Q13043 487 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 FAM26DQ5JW98 314 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 ZNF618Q5T7W0 954 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 ZNF720Q7Z2F6 126 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 HAUS6Q7Z4H7 955 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 ZBTB8OSQ8IWT0 167 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 FIZ1Q96SL8 496 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 OSMRQ99650 979 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 GCOM2Q9BZD3 368 aaPredicted RBP13.49□□□□□ -0.25
SDC1-206ENST00000482879 C2orf40Q9H1Z8 148 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 IFT122Q9HBG6 1241 aa13.49□□□□□ -0.25
SDC1-206ENST00000482879 SIP14410 1827 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 ADGRA3Q8IWK6 1321 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 DENND3A2RUS2 1198 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 K7ERI5 159 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 MYBP10242 640 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 SELPP16109 830 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 EFNA5P52803 228 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 RBL2Q08999 1139 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 MGAT3Q09327 533 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 MORC3Q14149 939 aa13.48□□□□□ -0.25
SDC1-206ENST00000482879 ZC2HC1CQ53FD0 456 aaPredicted RBP13.48□□□□□ -0.25
SDC1-206ENST00000482879 ZNF658Q5TYW1 1059 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms