RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 RGS18Q9NS28 235 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 TFIP11Q9UBB9 837 aaKnown RBP18.41■□□□□ 0.54
HMGN1-214ENST00000482733 YBX2Q9Y2T7 364 aaKnown RBP18.41■□□□□ 0.54
HMGN1-214ENST00000482733 INSL6Q9Y581 213 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 ATP6V1DQ9Y5K8 247 aa18.41■□□□□ 0.54
HMGN1-214ENST00000482733 STAG3L1P0CL83 205 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 GLRA2P23416 452 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 PTENP60484 403 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 SLC24A5Q71RS6 500 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 MAEAQ7L5Y9 396 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 CATSPER4Q7RTX7 472 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 IFNLR1Q8IU57 520 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-214ENST00000482733 NPAS4Q8IUM7 802 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 DEFB123Q8N688 67 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 SYT2Q8N9I0 419 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-214ENST00000482733 ASAP3Q8TDY4 903 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 KIFAP3Q92845 792 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 ADAM2Q99965 735 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 NKX2-4Q9H2Z4 354 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 KCND2Q9NZV8 630 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 CCDC39Q9UFE4 941 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 EVPLQ92817 2033 aa18.4■□□□□ 0.54
HMGN1-214ENST00000482733 SIP14410 1827 aa18.39■□□□□ 0.54
HMGN1-214ENST00000482733 UPP2O95045 317 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 PLA2G4BP0C869 781 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 SARSP49591 514 aaKnown RBP18.39■□□□□ 0.53
HMGN1-214ENST00000482733 HTRA4P83105 476 aaPredicted RBP18.39■□□□□ 0.53
HMGN1-214ENST00000482733 CAPSQ13938 189 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 DSC3Q14574 896 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 PPP2R5AQ15172 486 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 FAM117BQ6P1L5 589 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 KCNK18Q7Z418 384 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 TMCO2Q7Z6W1 182 aaPredicted RBP18.39■□□□□ 0.53
HMGN1-214ENST00000482733 KCNG4Q8TDN1 519 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 SEMA6BQ9H3T3 888 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 ZNF576Q9H609 170 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 GPRC5CQ9NQ84 441 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 DACT1Q9NYF0 836 aa18.39■□□□□ 0.53
HMGN1-214ENST00000482733 DAXXQ9UER7 740 aaPredicted RBP18.39■□□□□ 0.53
HMGN1-214ENST00000482733 MGEA5O60502 916 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 CSDE1O75534 798 aaKnown RBP18.38■□□□□ 0.53
HMGN1-214ENST00000482733 CA3P07451 260 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 MYOGP15173 224 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
HMGN1-214ENST00000482733 KARSQ15046 597 aaKnown RBP18.38■□□□□ 0.53
HMGN1-214ENST00000482733 FOXD4L6Q3SYB3 417 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-214ENST00000482733 PPP2R2DQ66LE6 453 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 RINT1Q6NUQ1 792 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 FOXD4L3Q6VB84 417 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-214ENST00000482733 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
HMGN1-214ENST00000482733 EPSTI1Q96J88 318 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 IFT74Q96LB3 600 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 CLIC6Q96NY7 704 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 YME1L1Q96TA2 773 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 PLIN2Q99541 437 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 C2orf40Q9H1Z8 148 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 LRFN2Q9ULH4 789 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 ZDHHC9Q9Y397 364 aa18.38■□□□□ 0.53
HMGN1-214ENST00000482733 C9IYK1 514 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 RBAK-RBAKDNI3L0D1 243 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 SSBP05455 408 aaKnown RBP eCLIP18.37■□□□□ 0.53
HMGN1-214ENST00000482733 PLCG1P19174 1290 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 FGFR4P22455 802 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 GUCY2CP25092 1073 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 NAMPTP43490 491 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 SLC12A3P55017 1021 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 NUCB2P80303 420 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 FAM189BP81408 668 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 DNM1Q05193 864 aaKnown RBP18.37■□□□□ 0.53
HMGN1-214ENST00000482733 C1orf186Q6ZWK4 172 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 ZBTB8OSQ8IWT0 167 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 CRIPAKQ8N1N5 446 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 DRC1Q96MC2 740 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 TTYH1Q9H313 450 aaPredicted RBP18.37■□□□□ 0.53
HMGN1-214ENST00000482733 ELAC1Q9H777 363 aaKnown RBP18.37■□□□□ 0.53
HMGN1-214ENST00000482733 KCNG1Q9UIX4 513 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 PCDHB7Q9Y5E2 793 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 ARID2Q68CP9 1835 aa18.37■□□□□ 0.53
HMGN1-214ENST00000482733 LRRIQ4A6NIV6 560 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 INO80B-WBP1J3KQ70 363 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 CUTAO60888 179 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 ERLIN2O94905 339 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 SKIP12755 728 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 AXLP30530 894 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 SPECC1Q5M775 1068 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 CDCA2Q69YH5 1023 aaPredicted RBP18.36■□□□□ 0.53
HMGN1-214ENST00000482733 Q7L0L9 218 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 MICAL3Q7RTP6 2002 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 SP7Q8TDD2 431 aaPredicted RBP18.36■□□□□ 0.53
HMGN1-214ENST00000482733 RAD54LQ92698 747 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 RUSC1Q9BVN2 902 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 TRAIPQ9BWF2 469 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 MINDY3Q9H8M7 445 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 C17orf75Q9HAS0 396 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 AGPAT5Q9NUQ2 364 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 TMEM161AQ9NX61 479 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 STK17AQ9UEE5 414 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 PIN4Q9Y237 131 aaKnown RBP18.36■□□□□ 0.53
HMGN1-214ENST00000482733 SZT2Q5T011 3432 aa18.36■□□□□ 0.53
HMGN1-214ENST00000482733 A0A0U1RQF3 1178 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms