RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZSCAN20P17040 1043 aaPredicted RBP23.2■■□□□ 1.3
SEC13-217ENST00000482647 GLRA2P23416 452 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 TXLNAP40222 546 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 PHKA2P46019 1235 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 POU5F1BQ06416 359 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 SPECC1Q5M775 1068 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 ASAP3Q8TDY4 903 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 EPSTI1Q96J88 318 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 RAD9AQ99638 391 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 ADAM2Q99965 735 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 GPRC5CQ9NQ84 441 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 RGS18Q9NS28 235 aa23.2■■□□□ 1.3
SEC13-217ENST00000482647 UPP2O95045 317 aa23.19■■□□□ 1.3
SEC13-217ENST00000482647 SSBP05455 408 aaKnown RBP eCLIP23.19■■□□□ 1.3
SEC13-217ENST00000482647 DNM1Q05193 864 aaKnown RBP23.19■■□□□ 1.3
SEC13-217ENST00000482647 KARSQ15046 597 aaKnown RBP23.19■■□□□ 1.3
SEC13-217ENST00000482647 FAM117BQ6P1L5 589 aa23.19■■□□□ 1.3
SEC13-217ENST00000482647 SYT2Q8N9I0 419 aaPredicted RBP23.19■■□□□ 1.3
SEC13-217ENST00000482647 KCNG4Q8TDN1 519 aa23.19■■□□□ 1.3
SEC13-217ENST00000482647 LINC01599Q8WXQ3 324 aa23.19■■□□□ 1.3
SEC13-217ENST00000482647 SYMPKQ92797 1274 aaKnown RBP23.19■■□□□ 1.3
SEC13-217ENST00000482647 C1orf112Q9NSG2 853 aa23.19■■□□□ 1.3
SEC13-217ENST00000482647 RNF216Q9NWF9 866 aaPredicted RBP23.19■■□□□ 1.3
SEC13-217ENST00000482647 CCDC39Q9UFE4 941 aa23.19■■□□□ 1.3
SEC13-217ENST00000482647 TMEM265A0A087WTH1 108 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 PLA2G4BP0C869 781 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 MYOGP15173 224 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 FGFR4P22455 802 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 PTENP60484 403 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 CAPSQ13938 189 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 ZNF697Q5TEC3 545 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 RINT1Q6NUQ1 792 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 USP49Q70CQ1 688 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 SLC24A5Q71RS6 500 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 CATSPER4Q7RTX7 472 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 KIFAP3Q92845 792 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 SLC28A3Q9HAS3 691 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 CHST12Q9NRB3 414 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 YBX2Q9Y2T7 364 aaKnown RBP23.18■■□□□ 1.3
SEC13-217ENST00000482647 INSL6Q9Y581 213 aa23.18■■□□□ 1.3
SEC13-217ENST00000482647 MGEA5O60502 916 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 PLCG1P19174 1290 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 NUCB2P80303 420 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 DSC3Q14574 896 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 PCBP1Q15365 356 aaKnown RBP eCLIP23.17■■□□□ 1.3
SEC13-217ENST00000482647 C1orf186Q6ZWK4 172 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 RUSC1Q9BVN2 902 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 TIPINQ9BVW5 301 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 NFKBIZQ9BYH8 718 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 NKX2-4Q9H2Z4 354 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 KCND2Q9NZV8 630 aa23.17■■□□□ 1.3
SEC13-217ENST00000482647 CUTAO60888 179 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 STAG3L1P0CL83 205 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 ANP32AP39687 249 aaKnown RBP23.16■■□□□ 1.3
SEC13-217ENST00000482647 SARSP49591 514 aaKnown RBP23.16■■□□□ 1.3
SEC13-217ENST00000482647 SLC12A3P55017 1021 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 PPP2R5AQ15172 486 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 IFNLR1Q8IU57 520 aaPredicted RBP23.16■■□□□ 1.3
SEC13-217ENST00000482647 DEFB123Q8N688 67 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 IFT74Q96LB3 600 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 MINDY3Q9H8M7 445 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 DACT1Q9NYF0 836 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 RCOR1Q9UKL0 485 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 SIP14410 1827 aa23.16■■□□□ 1.3
SEC13-217ENST00000482647 LRRIQ4A6NIV6 560 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 INO80B-WBP1J3KQ70 363 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 CA3P07451 260 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 GUCY2CP25092 1073 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 DDIT3P35638 169 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 ME1P48163 572 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 FAM189BP81408 668 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 HTRA4P83105 476 aaPredicted RBP23.15■■□□□ 1.3
SEC13-217ENST00000482647 NCBP1Q09161 790 aaKnown RBP23.15■■□□□ 1.3
SEC13-217ENST00000482647 RRAGBQ5VZM2 374 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 NPAS4Q8IUM7 802 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 RAD54LQ92698 747 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 DRC1Q96MC2 740 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 YME1L1Q96TA2 773 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 SEMA6BQ9H3T3 888 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 LRFN2Q9ULH4 789 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 PCDHB7Q9Y5E2 793 aa23.15■■□□□ 1.3
SEC13-217ENST00000482647 C9IYK1 514 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 ERLIN2O94905 339 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 NCLP19338 710 aaKnown RBP23.14■■□□□ 1.29
SEC13-217ENST00000482647 NAMPTP43490 491 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 KRT85P78386 507 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 PPP2R2DQ66LE6 453 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 CCDC73Q6ZRK6 1079 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 ZBTB8OSQ8IWT0 167 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 CRIPAKQ8N1N5 446 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 C2orf40Q9H1Z8 148 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 ZNF576Q9H609 170 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 POLD4Q9HCU8 107 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 BLOC1S4Q9NUP1 217 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 AGPAT5Q9NUQ2 364 aa23.14■■□□□ 1.29
SEC13-217ENST00000482647 PIN4Q9Y237 131 aaKnown RBP23.14■■□□□ 1.29
SEC13-217ENST00000482647 CHD9Q3L8U1 2897 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 HIP1RO75146 1068 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 MBTD1Q05BQ5 628 aa23.13■■□□□ 1.29
SEC13-217ENST00000482647 DHX8Q14562 1220 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms