RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 TMEM60Q9H2L4 133 aa17.14■□□□□ 0.33
EXOSC3-205ENST00000482614 ALG13Q9NP73 1137 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-205ENST00000482614 ANKEF1Q9NU02 776 aa17.14■□□□□ 0.33
EXOSC3-205ENST00000482614 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
EXOSC3-205ENST00000482614 PCDHB12Q9Y5F1 795 aa17.14■□□□□ 0.33
EXOSC3-205ENST00000482614 ARID2Q68CP9 1835 aa17.14■□□□□ 0.33
EXOSC3-205ENST00000482614 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 TNFRSF10AO00220 468 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 ZBTB39O15060 712 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 NCK2O43639 380 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 ITGB1P05556 798 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 FGFR1P11362 822 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 EMC2Q15006 297 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 NOSTRINQ8IVI9 506 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 ABI1Q8IZP0 508 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 SPPL3Q8TCT6 385 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 PRPF31Q8WWY3 499 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 TMEM143Q96AN5 459 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 MTRQ99707 1265 aa17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 TYW1Q9NV66 732 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
EXOSC3-205ENST00000482614 VCANP13611 3396 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 TRAPPC10P48553 1259 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 ZNF174Q15697 407 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 SRGAP1Q7Z6B7 1085 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 CASD1Q96PB1 797 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 TRAIPQ9BWF2 469 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 RNF19AQ9NV58 838 aa17.12■□□□□ 0.33
EXOSC3-205ENST00000482614 ATG2AQ2TAZ0 1938 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 POTEMA6NI47 508 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 SKIP12755 728 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 LAG3P18627 525 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 KCNA5P22460 613 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 U2AF2P26368 475 aaKnown RBP eCLIP17.11■□□□□ 0.335e-10■■■■■ 27.4
EXOSC3-205ENST00000482614 MCM2P49736 904 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 UBE3AQ05086 875 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 LAMTOR4Q0VGL1 99 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 LEXMQ3ZCV2 418 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 ZNF598Q86UK7 904 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 FERMT3Q86UX7 667 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 COLGALT1Q8NBJ5 622 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 RNF169Q8NCN4 708 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 POF1BQ8WVV4 589 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 PPP2R3CQ969Q6 453 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 CWH43Q9H720 699 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 TUFT1Q9NNX1 390 aa17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 BMP2KQ9NSY1 1161 aaPredicted RBP17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
EXOSC3-205ENST00000482614 DGAT1O75907 488 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 TECP42680 631 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 PHKA2P46019 1235 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 CAMK1Q14012 370 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 COL19A1Q14993 1142 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 RSPH1Q8WYR4 309 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 TMX3Q96JJ7 454 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 POLR3CQ9BUI4 534 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 XPNPEP1Q9NQW7 623 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
EXOSC3-205ENST00000482614 CUL9Q8IWT3 2517 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 FGF18O76093 207 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 SPATA31C1P0DKV0 1188 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 DNAJB1P25685 340 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 RARRES1P49788 294 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 RAB27AP51159 221 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 TFDP1Q14186 410 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 PUS10Q3MIT2 529 aaKnown RBP17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 CLLU1OSQ5K130 101 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 THNSL1Q8IYQ7 743 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 RNF149Q8NC42 400 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 PIGOQ8TEQ8 1089 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 FAM105AQ9NUU6 356 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 MYO7AQ13402 2215 aa17.09■□□□□ 0.33
EXOSC3-205ENST00000482614 ZNF623O75123 536 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 CSPG5O95196 566 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 POU5F1BQ06416 359 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 HYAL1Q12794 435 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 PCBP1Q15365 356 aaKnown RBP eCLIP17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 LRRC55Q6ZSA7 311 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 EP400NLQ6ZTU2 488 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 HELQQ8TDG4 1101 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 ZNF558Q96NG5 402 aa17.08■□□□□ 0.32
EXOSC3-205ENST00000482614 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms