RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 LRWD1Q9UFC0 647 aa18.45■□□□□ 0.54
VAMP4-204ENST00000482519 REV3LO60673 3130 aa18.45■□□□□ 0.54
VAMP4-204ENST00000482519 RALGAPA2Q2PPJ7 1873 aa18.45■□□□□ 0.54
VAMP4-204ENST00000482519 GAS2O43903 313 aaKnown RBP18.44■□□□□ 0.54
VAMP4-204ENST00000482519 DGAT1O75907 488 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 CCT6AP40227 531 aaKnown RBP18.44■□□□□ 0.54
VAMP4-204ENST00000482519 RARRES1P49788 294 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 FAM189BP81408 668 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 TWF2Q6IBS0 349 aaKnown RBP18.44■□□□□ 0.54
VAMP4-204ENST00000482519 MAEAQ7L5Y9 396 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 FERMT3Q86UX7 667 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 RNF149Q8NC42 400 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 CLP1Q92989 425 aaKnown RBP18.44■□□□□ 0.54
VAMP4-204ENST00000482519 NACC1Q96RE7 527 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 C11orf84Q9BUA3 381 aaPredicted RBP18.44■□□□□ 0.54
VAMP4-204ENST00000482519 POLR3CQ9BUI4 534 aaPredicted RBP18.44■□□□□ 0.54
VAMP4-204ENST00000482519 IFT122Q9HBG6 1241 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 XPNPEP1Q9NQW7 623 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 DACT1Q9NYF0 836 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 LMCD1Q9NZU5 365 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 THEGQ9P2T0 379 aa18.44■□□□□ 0.54
VAMP4-204ENST00000482519 PIN4Q9Y237 131 aaKnown RBP18.44■□□□□ 0.54
VAMP4-204ENST00000482519 DLL1O00548 723 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 ASAP2O43150 1006 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 USO1O60763 962 aaKnown RBP18.43■□□□□ 0.54
VAMP4-204ENST00000482519 RB1P06400 928 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 LINC00271P0C7V0 271 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 XRCC6P12956 609 aaKnown RBP eCLIP18.43■□□□□ 0.54
VAMP4-204ENST00000482519 FXR2P51116 673 aaKnown RBP eCLIP18.43■□□□□ 0.54
VAMP4-204ENST00000482519 RILPL1Q5EBL4 403 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 ECHDC2Q86YB7 292 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 ABI1Q8IZP0 508 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 MRPL38Q96DV4 380 aaKnown RBP18.43■□□□□ 0.54
VAMP4-204ENST00000482519 ELAC1Q9H777 363 aaKnown RBP18.43■□□□□ 0.54
VAMP4-204ENST00000482519 ALG13Q9NP73 1137 aaKnown RBP18.43■□□□□ 0.54
VAMP4-204ENST00000482519 CHST12Q9NRB3 414 aa18.43■□□□□ 0.54
VAMP4-204ENST00000482519 FNDC1Q4ZHG4 1894 aaPredicted RBP18.42■□□□□ 0.54
VAMP4-204ENST00000482519 RPA1P27694 616 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 PHKA2P46019 1235 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 TFDP1Q14186 410 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 MXD4Q14582 209 aaPredicted RBP18.42■□□□□ 0.54
VAMP4-204ENST00000482519 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 HAUS3Q68CZ6 603 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 DTHD1Q6ZMT9 781 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 ASAP3Q8TDY4 903 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 RAB34Q9BZG1 259 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 POLR3FQ9H1D9 316 aaPredicted RBP18.42■□□□□ 0.54
VAMP4-204ENST00000482519 MINDY3Q9H8M7 445 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 KIAA1671Q9BY89 1806 aa18.42■□□□□ 0.54
VAMP4-204ENST00000482519 A0A0U1RQF3 1178 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
VAMP4-204ENST00000482519 ARHGEF35A5YM69 484 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 C5orf67F2Z3F1 127 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 LAD1O00515 517 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 GRM6O15303 877 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 HOXA2O43364 376 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 TFF2Q03403 129 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 CUL4AQ13619 759 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 PDIA5Q14554 519 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 SRGAP1Q7Z6B7 1085 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 SNX29Q8TEQ0 813 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 PLVAPQ9BX97 442 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.41■□□□□ 0.54
VAMP4-204ENST00000482519 TYW1Q9NV66 732 aaKnown RBP18.41■□□□□ 0.54
VAMP4-204ENST00000482519 HCSTQ9UBK5 93 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 DBR1Q9UK59 544 aaKnown RBP18.41■□□□□ 0.54
VAMP4-204ENST00000482519 KIAA1024Q9UPX6 916 aa18.41■□□□□ 0.54
VAMP4-204ENST00000482519 PP2D1A8MPX8 630 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 ERLIN2O94905 339 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 ARL2P36404 184 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 MRPS5P82675 430 aaKnown RBP18.4■□□□□ 0.54
VAMP4-204ENST00000482519 ZRSR1Q15695 479 aaKnown RBP18.4■□□□□ 0.54
VAMP4-204ENST00000482519 IL17AQ16552 155 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 KLHL23Q8NBE8 558 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 HELQQ8TDG4 1101 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 ATXN2LQ8WWM7 1075 aaKnown RBP18.4■□□□□ 0.54
VAMP4-204ENST00000482519 HLA-CQ95604 372 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 TMEM117Q9H0C3 514 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 GPRC5CQ9NQ84 441 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 AAASQ9NRG9 546 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 PLAGL2Q9UPG8 496 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 PCDHB12Q9Y5F1 795 aa18.4■□□□□ 0.54
VAMP4-204ENST00000482519 INO80B-WBP1J3KQ70 363 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 EOMESO95936 686 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 CDC25AP30304 524 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 CAPSQ13938 189 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 ECM1Q16610 540 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 TIGD5Q53EQ6 642 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 KRT79Q5XKE5 535 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 PADI6Q6TGC4 694 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 IGSF22Q8N9C0 903 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 LPPQ93052 612 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 CASD1Q96PB1 797 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 ASB2Q96Q27 587 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 AGPAT5Q9NUQ2 364 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 DDX19AQ9NUU7 478 aaKnown RBP18.39■□□□□ 0.53
VAMP4-204ENST00000482519 RNF19AQ9NV58 838 aa18.39■□□□□ 0.53
VAMP4-204ENST00000482519 ITGB1P05556 798 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 SKIP12755 728 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms