RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 PRPHP41219 470 aa22.34■■□□□ 1.17
CLIP2-205ENST00000482424 CCDC85BQ15834 202 aaPredicted RBP22.34■■□□□ 1.17
CLIP2-205ENST00000482424 FERMT3Q86UX7 667 aa22.34■■□□□ 1.17
CLIP2-205ENST00000482424 PPM1EQ8WY54 764 aa22.34■■□□□ 1.17
CLIP2-205ENST00000482424 NACC1Q96RE7 527 aa22.34■■□□□ 1.17
CLIP2-205ENST00000482424 TRAIPQ9BWF2 469 aa22.34■■□□□ 1.17
CLIP2-205ENST00000482424 FNDC1Q4ZHG4 1894 aaPredicted RBP22.34■■□□□ 1.17
CLIP2-205ENST00000482424 SPTBN5Q9NRC6 3674 aaKnown RBP22.33■■□□□ 1.17
CLIP2-205ENST00000482424 POU5F1BQ06416 359 aa22.33■■□□□ 1.17
CLIP2-205ENST00000482424 SRGAP1Q7Z6B7 1085 aa22.33■■□□□ 1.17
CLIP2-205ENST00000482424 INTS4Q96HW7 963 aaKnown RBP22.33■■□□□ 1.17
CLIP2-205ENST00000482424 ATP6V0A4Q9HBG4 840 aa22.33■■□□□ 1.17
CLIP2-205ENST00000482424 BMP2KQ9NSY1 1161 aaPredicted RBP22.33■■□□□ 1.17
CLIP2-205ENST00000482424 LRWD1Q9UFC0 647 aa22.33■■□□□ 1.17
CLIP2-205ENST00000482424 STK24Q9Y6E0 443 aa22.33■■□□□ 1.17
CLIP2-205ENST00000482424 REV3LO60673 3130 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 A0A087WWV3 80 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 A0A0U1RQF3 1178 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 ARL2P36404 184 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 GATMP50440 423 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 MXD4Q14582 209 aaPredicted RBP22.32■■□□□ 1.16
CLIP2-205ENST00000482424 IL17AQ16552 155 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 FAM102BQ5T8I3 360 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 HAUS3Q68CZ6 603 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 ECHDC2Q86YB7 292 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 DACT1Q9NYF0 836 aa22.32■■□□□ 1.16
CLIP2-205ENST00000482424 MRPL42Q9Y6G3 142 aaKnown RBP22.32■■□□□ 1.16
CLIP2-205ENST00000482424 SRGAP2CP0DJJ0 459 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 CTNNB1P35222 781 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 ATP2C1P98194 919 aaPredicted RBP22.31■■□□□ 1.16
CLIP2-205ENST00000482424 GPM6BQ13491 265 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 ECM1Q16610 540 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 POTEGQ6S5H5 508 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 ZNF598Q86UK7 904 aaKnown RBP22.31■■□□□ 1.16
CLIP2-205ENST00000482424 IFNLR1Q8IU57 520 aaPredicted RBP22.31■■□□□ 1.16
CLIP2-205ENST00000482424 PLVAPQ9BX97 442 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 RAB34Q9BZG1 259 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 MINDY3Q9H8M7 445 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 PRDM6Q9NQX0 595 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 RNF19AQ9NV58 838 aa22.31■■□□□ 1.16
CLIP2-205ENST00000482424 KIAA1671Q9BY89 1806 aa22.3■■□□□ 1.16
CLIP2-205ENST00000482424 K7ELQ4 463 aaPredicted RBP22.3■■□□□ 1.16
CLIP2-205ENST00000482424 EOMESO95936 686 aa22.3■■□□□ 1.16
CLIP2-205ENST00000482424 PDCP20941 246 aa22.3■■□□□ 1.16
CLIP2-205ENST00000482424 PAN2Q504Q3 1202 aaKnown RBP22.3■■□□□ 1.16
CLIP2-205ENST00000482424 DTHD1Q6ZMT9 781 aa22.3■■□□□ 1.16
CLIP2-205ENST00000482424 MICALL1Q8N3F8 863 aa22.3■■□□□ 1.16
CLIP2-205ENST00000482424 RNF149Q8NC42 400 aa22.3■■□□□ 1.16
CLIP2-205ENST00000482424 P2RX5Q93086 422 aa22.3■■□□□ 1.16
CLIP2-205ENST00000482424 MRPL38Q96DV4 380 aaKnown RBP22.3■■□□□ 1.16
CLIP2-205ENST00000482424 CCDC43Q96MW1 224 aaKnown RBP22.3■■□□□ 1.16
CLIP2-205ENST00000482424 HOXA2O43364 376 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 FGFR1P11362 822 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 ATF7P17544 494 aaPredicted RBP22.29■■□□□ 1.16
CLIP2-205ENST00000482424 CCT6AP40227 531 aaKnown RBP22.29■■□□□ 1.16
CLIP2-205ENST00000482424 PTENP60484 403 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 PCBP1Q15365 356 aaKnown RBP eCLIP22.29■■□□□ 1.16
CLIP2-205ENST00000482424 NAALADL2Q58DX5 795 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 CATSPER4Q7RTX7 472 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 BRAPQ7Z569 592 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 SNX21Q969T3 373 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 C11orf84Q9BUA3 381 aaPredicted RBP22.29■■□□□ 1.16
CLIP2-205ENST00000482424 NFKBIZQ9BYH8 718 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 AGPAT5Q9NUQ2 364 aa22.29■■□□□ 1.16
CLIP2-205ENST00000482424 A0A0C4DFX4 3053 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 TBKBP1A7MCY6 615 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 USO1O60763 962 aaKnown RBP22.28■■□□□ 1.16
CLIP2-205ENST00000482424 IBSPP21815 317 aaPredicted RBP22.28■■□□□ 1.16
CLIP2-205ENST00000482424 GLRA2P23416 452 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 PHKA2P46019 1235 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 CAPSQ13938 189 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 PTPROQ16827 1216 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 ARL6IP4Q66PJ3 421 aaKnown RBP22.28■■□□□ 1.16
CLIP2-205ENST00000482424 MCPH1Q8NEM0 835 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 ASAP3Q8TDY4 903 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 CASD1Q96PB1 797 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 TMEM117Q9H0C3 514 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 LMAN2LQ9H0V9 348 aa22.28■■□□□ 1.16
CLIP2-205ENST00000482424 PIN4Q9Y237 131 aaKnown RBP22.28■■□□□ 1.16
CLIP2-205ENST00000482424 ZNF623O75123 536 aa22.27■■□□□ 1.16
CLIP2-205ENST00000482424 SKIP12755 728 aa22.27■■□□□ 1.16
CLIP2-205ENST00000482424 CYP11B2P19099 503 aa22.27■■□□□ 1.16
CLIP2-205ENST00000482424 HOXA11P31270 313 aaPredicted RBP22.27■■□□□ 1.16
CLIP2-205ENST00000482424 TFDP1Q14186 410 aa22.27■■□□□ 1.16
CLIP2-205ENST00000482424 SNX29Q8TEQ0 813 aa22.27■■□□□ 1.16
CLIP2-205ENST00000482424 ATXN2LQ8WWM7 1075 aaKnown RBP22.27■■□□□ 1.16
CLIP2-205ENST00000482424 MMTAG2Q9BU76 263 aaKnown RBP22.27■■□□□ 1.16
CLIP2-205ENST00000482424 THEGQ9P2T0 379 aa22.27■■□□□ 1.16
CLIP2-205ENST00000482424 KIAA1024Q9UPX6 916 aa22.27■■□□□ 1.16
CLIP2-205ENST00000482424 GRM6O15303 877 aa22.26■■□□□ 1.15
CLIP2-205ENST00000482424 KRT79Q5XKE5 535 aa22.26■■□□□ 1.15
CLIP2-205ENST00000482424 TWF2Q6IBS0 349 aaKnown RBP22.26■■□□□ 1.15
CLIP2-205ENST00000482424 PADI6Q6TGC4 694 aa22.26■■□□□ 1.15
CLIP2-205ENST00000482424 POLR3FQ9H1D9 316 aaPredicted RBP22.26■■□□□ 1.15
CLIP2-205ENST00000482424 CWH43Q9H720 699 aa22.26■■□□□ 1.15
CLIP2-205ENST00000482424 FAM105AQ9NUU6 356 aa22.26■■□□□ 1.15
CLIP2-205ENST00000482424 TYW1Q9NV66 732 aaKnown RBP22.26■■□□□ 1.15
CLIP2-205ENST00000482424 PLAGL2Q9UPG8 496 aa22.26■■□□□ 1.15
CLIP2-205ENST00000482424 ARHGEF35A5YM69 484 aa22.25■■□□□ 1.15
CLIP2-205ENST00000482424 PP2D1A8MPX8 630 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms