RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 WASF1Q92558 559 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 TNFRSF25Q93038 417 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 PPP2R3CQ969Q6 453 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 CYP26B1Q9NR63 512 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 TLR9Q9NR96 1032 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 BMP2KQ9NSY1 1161 aaPredicted RBP20.81■□□□□ 0.92
CLK1-211ENST00000481641 RGL1Q9NZL6 768 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 CLEC1BQ9P126 229 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 CD207Q9UJ71 328 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 FAM50BQ9Y247 325 aa20.81■□□□□ 0.92
CLK1-211ENST00000481641 A0A0U1RQF3 1178 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 ZBTB39O15060 712 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 GLP2RO95838 553 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 P4HBP07237 508 aaKnown RBP20.8■□□□□ 0.92
CLK1-211ENST00000481641 LAG3P18627 525 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 LONRF3Q496Y0 759 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 ZNF598Q86UK7 904 aaKnown RBP20.8■□□□□ 0.92
CLK1-211ENST00000481641 ABI1Q8IZP0 508 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 EFHBQ8N7U6 833 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 HELQQ8TDG4 1101 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 DYDC2Q96IM9 177 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 NLRP4Q96MN2 994 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 TLE6Q9H808 572 aa20.8■□□□□ 0.92
CLK1-211ENST00000481641 BARX2Q9UMQ3 279 aaPredicted RBP20.8■□□□□ 0.92
CLK1-211ENST00000481641 WNT7AO00755 349 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 TBX3O15119 743 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 HOXA2O43364 376 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 UBE3AQ05086 875 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 ST3GAL1Q11201 340 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 SMAD4Q13485 552 aaKnown RBP20.79■□□□□ 0.92
CLK1-211ENST00000481641 CTTNQ14247 550 aaKnown RBP20.79■□□□□ 0.92
CLK1-211ENST00000481641 EPHA7Q15375 998 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 SMAD2Q15796 467 aaKnown RBP20.79■□□□□ 0.92
CLK1-211ENST00000481641 TMEM31Q5JXX7 168 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 KCNT2Q6UVM3 1135 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 LPPQ93052 612 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 TMEM143Q96AN5 459 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 MSLNLQ96KJ4 702 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 CEP170P1Q96L14 293 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 LXNQ9BS40 222 aa20.79■□□□□ 0.92
CLK1-211ENST00000481641 BTBD18B2RXH4 712 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 FSCN2O14926 492 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 CDC42EP1Q00587 391 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 CYP4A11Q02928 519 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 SPIRE1Q08AE8 756 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 PLPP4Q5VZY2 271 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 ZNF410Q86VK4 478 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 ADHFE1Q8IWW8 467 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 LRRC43Q8N309 656 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 VN1R2Q8NFZ6 395 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 MRPS27Q92552 414 aaKnown RBP20.78■□□□□ 0.92
CLK1-211ENST00000481641 ZNF558Q96NG5 402 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 NAP1L4Q99733 375 aaKnown RBP20.78■□□□□ 0.92
CLK1-211ENST00000481641 DACT1Q9NYF0 836 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 PRKAG3Q9UGI9 489 aa20.78■□□□□ 0.92
CLK1-211ENST00000481641 PIN4Q9Y237 131 aaKnown RBP20.78■□□□□ 0.92
CLK1-211ENST00000481641 C19orf67A6NJJ6 358 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 EOMESO95936 686 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 SFPQP23246 707 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLK1-211ENST00000481641 PHKA2P46019 1235 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 POLGP54098 1239 aaPredicted RBP20.77■□□□□ 0.92
CLK1-211ENST00000481641 CSPP1Q1MSJ5 1256 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 TWF2Q6IBS0 349 aaKnown RBP20.77■□□□□ 0.92
CLK1-211ENST00000481641 CATSPER4Q7RTX7 472 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 IFT122Q9HBG6 1241 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 BRMS1Q9HCU9 246 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 CHST12Q9NRB3 414 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 COL4A3BPQ9Y5P4 624 aa20.77■□□□□ 0.92
CLK1-211ENST00000481641 MEIS3P2A8K0S8 358 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 NT5C1B-RDH14C9J2C7 533 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 DKC1O60832 514 aaKnown RBP eCLIP20.76■□□□□ 0.91
CLK1-211ENST00000481641 GPR37L1O60883 481 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 BAG4O95429 457 aaKnown RBP20.76■□□□□ 0.91
CLK1-211ENST00000481641 SRGAP2CP0DJJ0 459 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 YWHABP31946 246 aaKnown RBP20.76■□□□□ 0.91
CLK1-211ENST00000481641 PLCB3Q01970 1234 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 DUSP6Q16828 381 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 C4orf19Q8IY42 314 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 DIS3L2Q8IYB7 885 aaKnown RBP20.76■□□□□ 0.91
CLK1-211ENST00000481641 PRPF31Q8WWY3 499 aaKnown RBP20.76■□□□□ 0.91
CLK1-211ENST00000481641 SLC7A3Q8WY07 619 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 TCF25Q9BQ70 676 aa20.76■□□□□ 0.91
CLK1-211ENST00000481641 JPH2Q9BR39 696 aaPredicted RBP20.76■□□□□ 0.91
CLK1-211ENST00000481641 DHX33Q9H6R0 707 aaKnown RBP20.76■□□□□ 0.91
CLK1-211ENST00000481641 HIDE1A8MVS5 230 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 EYA4O95677 639 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 XKR9Q5GH70 373 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 TPH2Q8IWU9 490 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 SLFN12Q8IYM2 578 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 INO80BQ9C086 356 aaPredicted RBP20.75■□□□□ 0.91
CLK1-211ENST00000481641 MINDY3Q9H8M7 445 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 ENTPD7Q9NQZ7 604 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 SPG21Q9NZD8 308 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 PUF60Q9UHX1 559 aaKnown RBP20.75■□□□□ 0.91
CLK1-211ENST00000481641 LZTS1Q9Y250 596 aa20.75■□□□□ 0.91
CLK1-211ENST00000481641 SLITRK3O94933 977 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 GUCY1B3Q02153 619 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 LAMTOR4Q0VGL1 99 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 COASYQ13057 564 aa20.74■□□□□ 0.91
CLK1-211ENST00000481641 EMC2Q15006 297 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms