RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 ECM1Q16610 540 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 LONRF3Q496Y0 759 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 MAEAQ7L5Y9 396 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 FERMT3Q86UX7 667 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 ZNF410Q86VK4 478 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 ECHDC2Q86YB7 292 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 EXOC8Q8IYI6 725 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 IL27Q8NEV9 243 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 PSPC1Q8WXF1 523 aaKnown RBP14.35□□□□□ -0.11
ABCF3-215ENST00000481116 MRPL38Q96DV4 380 aaKnown RBP14.35□□□□□ -0.11
ABCF3-215ENST00000481116 COL25A1Q9BXS0 654 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-215ENST00000481116 ATP6V0A4Q9HBG4 840 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 TUFT1Q9NNX1 390 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 TMEM161AQ9NX61 479 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 LMCD1Q9NZU5 365 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 PPME1Q9Y570 386 aa14.35□□□□□ -0.11
ABCF3-215ENST00000481116 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.35□□□□□ -0.11
ABCF3-215ENST00000481116 MYH11P35749 1972 aa14.34□□□□□ -0.11
ABCF3-215ENST00000481116 C5orf67F2Z3F1 127 aa14.34□□□□□ -0.11
ABCF3-215ENST00000481116 USO1O60763 962 aaKnown RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 IL17AQ16552 155 aa14.34□□□□□ -0.11
ABCF3-215ENST00000481116 SPOUT1Q5T280 376 aaKnown RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 CATSPER4Q7RTX7 472 aa14.34□□□□□ -0.11
ABCF3-215ENST00000481116 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
ABCF3-215ENST00000481116 ASAP3Q8TDY4 903 aa14.34□□□□□ -0.11
ABCF3-215ENST00000481116 TCP11Q8WWU5 503 aa14.34□□□□□ -0.11
ABCF3-215ENST00000481116 CCDC43Q96MW1 224 aaKnown RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 POLR3CQ9BUI4 534 aaPredicted RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 ELAC1Q9H777 363 aaKnown RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 PIN4Q9Y237 131 aaKnown RBP14.34□□□□□ -0.11
ABCF3-215ENST00000481116 XIRP2A4UGR9 3374 aa14.33□□□□□ -0.11
ABCF3-215ENST00000481116 PP2D1A8MPX8 630 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 DGAT1O75907 488 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 RB1P06400 928 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 ATF7P17544 494 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 DNAJB1P25685 340 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 RPA1P27694 616 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 CCT6AP40227 531 aaKnown RBP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 CUL4AQ13619 759 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 CLLU1OSQ5K130 101 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 TWF2Q6IBS0 349 aaKnown RBP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 LRRC55Q6ZSA7 311 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 ERMNQ8TAM6 284 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 LPPQ93052 612 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 CASD1Q96PB1 797 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 INO80BQ9C086 356 aaPredicted RBP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 CWH43Q9H720 699 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 POLD4Q9HCU8 107 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 GPRC5CQ9NQ84 441 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 TYW1Q9NV66 732 aaKnown RBP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 LRWD1Q9UFC0 647 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.12
ABCF3-215ENST00000481116 TDRD15B5MCY1 1934 aaKnown RBP14.33□□□□□ -0.12
ABCF3-215ENST00000481116 A0A0U1RQF3 1178 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 MEIS3P2A8K0S8 358 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 ASAP2O43150 1006 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 GAS2O43903 313 aaKnown RBP14.32□□□□□ -0.12
ABCF3-215ENST00000481116 ITGB1P05556 798 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 CDC25AP30304 524 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 ARL2P36404 184 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 PHKA2P46019 1235 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 KCNQ1P51787 676 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 CAPSQ13938 189 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 CAMK1Q14012 370 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 PTPROQ16827 1216 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 TCEAL5Q5H9L2 206 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 FAM43BQ6ZT52 329 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-215ENST00000481116 SRGAP1Q7Z6B7 1085 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 ZNF598Q86UK7 904 aaKnown RBP14.32□□□□□ -0.12
ABCF3-215ENST00000481116 HELQQ8TDG4 1101 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 ATXN2LQ8WWM7 1075 aaKnown RBP14.32□□□□□ -0.12
ABCF3-215ENST00000481116 ASB2Q96Q27 587 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 C11orf84Q9BUA3 381 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-215ENST00000481116 POLR3FQ9H1D9 316 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-215ENST00000481116 CHST12Q9NRB3 414 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
ABCF3-215ENST00000481116 DACT1Q9NYF0 836 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 PLAGL2Q9UPG8 496 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 BRWD1Q9NSI6 2320 aa14.32□□□□□ -0.12
ABCF3-215ENST00000481116 MYH15Q9Y2K3 1946 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 VCANP13611 3396 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 XRCC6P12956 609 aaKnown RBP eCLIP14.31□□□□□ -0.12
ABCF3-215ENST00000481116 GLRA2P23416 452 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 MRPS5P82675 430 aaKnown RBP14.31□□□□□ -0.12
ABCF3-215ENST00000481116 RILPL1Q5EBL4 403 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 TJAP1Q5JTD0 557 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 IGSF22Q8N9C0 903 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 COLGALT1Q8NBJ5 622 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 SPPL3Q8TCT6 385 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 SNX29Q8TEQ0 813 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 HLA-CQ95604 372 aa14.31□□□□□ -0.12
ABCF3-215ENST00000481116 CPB2Q96IY4 423 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms