RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 TEX51A0A1B0GUA7 166 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 SEMA7AO75326 666 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 APPP05067 770 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 SRGAP2CP0DJJ0 459 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 GNAT1P11488 350 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 SDSP20132 328 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 ZNF200P98182 395 aaPredicted RBP8.66□□□□□ -1.02
CBX3-206ENST00000481057 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 FAM109BQ6ICB4 259 aaPredicted RBP8.66□□□□□ -1.02
CBX3-206ENST00000481057 FBXW5Q969U6 566 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 GDF15Q99988 308 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 SLC6A20Q9NP91 592 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 MBD1Q9UIS9 605 aaPredicted RBP8.66□□□□□ -1.02
CBX3-206ENST00000481057 PALD1Q9ULE6 856 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
CBX3-206ENST00000481057 FAM208AQ9UK61 1670 aaKnown RBP8.65□□□□□ -1.02
CBX3-206ENST00000481057 CD163L1Q9NR16 1453 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 MAP3K19Q56UN5 1328 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 HGSO14964 777 aaPredicted RBP8.65□□□□□ -1.02
CBX3-206ENST00000481057 TADA3O75528 432 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 CKMP06732 381 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 FBLN1P23142 703 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 IGFALSP35858 605 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 SPIRE1Q08AE8 756 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 OGFOD2Q6N063 350 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 NIM1KQ8IY84 436 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 CDX2Q99626 313 aaPredicted RBP8.65□□□□□ -1.02
CBX3-206ENST00000481057 CNTD2Q9H8S5 307 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 SIRT5Q9NXA8 310 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 MAGEC2Q9UBF1 373 aaPredicted RBP8.65□□□□□ -1.02
CBX3-206ENST00000481057 TNPO3Q9Y5L0 923 aaKnown RBP8.65□□□□□ -1.02
CBX3-206ENST00000481057 CACNA1SQ13698 1873 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 LTN1O94822 1766 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 BCORQ6W2J9 1755 aa8.65□□□□□ -1.02
CBX3-206ENST00000481057 KDRP35968 1356 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 CCDC66A2RUB6 948 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 KRIT1O00522 736 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 CYP27B1O15528 508 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 FARP2O94887 1054 aaPredicted RBP8.64□□□□□ -1.03
CBX3-206ENST00000481057 ASLP04424 464 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 PYGMP11217 842 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 COL6A2P12110 1019 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 TM4SF4P48230 202 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 KCTD2Q14681 263 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 FAM47CQ5HY64 1035 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 ABHD17CQ6PCB6 329 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 C16orf59Q7L2K0 433 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 TDHQ8IZJ6 230 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 UHMK1Q8TAS1 419 aaKnown RBP8.64□□□□□ -1.03
CBX3-206ENST00000481057 ALG3Q92685 438 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 BCAS3Q9H6U6 928 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 INTS7Q9NVH2 962 aaKnown RBP8.64□□□□□ -1.03
CBX3-206ENST00000481057 TMOD3Q9NYL9 352 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 GPRC5DQ9NZD1 345 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 CBLCQ9ULV8 474 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 PCDHB4Q9Y5E5 795 aa8.64□□□□□ -1.03
CBX3-206ENST00000481057 MYH14Q7Z406 1995 aaKnown RBP8.64□□□□□ -1.03
CBX3-206ENST00000481057 ZFHX4Q86UP3 3567 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 IRS4O14654 1257 aaPredicted RBP8.63□□□□□ -1.03
CBX3-206ENST00000481057 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.03
CBX3-206ENST00000481057 OPA1O60313 960 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 MAFKO60675 156 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 CDR1P51861 262 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 ST5P78524 1137 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 ZNF460Q14592 562 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 SLC9C1Q4G0N8 1177 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 EGFLAMQ63HQ2 1017 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 MILR1Q7Z6M3 343 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 POU5F2Q8N7G0 328 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 PHOSPHO1Q8TCT1 267 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 RAPGEF4Q8WZA2 1011 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 FAM84AQ96KN4 292 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 BRIP1Q9BX63 1249 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 CELF4Q9BZC1 486 aaKnown RBP8.63□□□□□ -1.03
CBX3-206ENST00000481057 SMOC1Q9H4F8 434 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 GCM1Q9NP62 436 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 MYOTQ9UBF9 498 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 COQ6Q9Y2Z9 468 aa8.63□□□□□ -1.03
CBX3-206ENST00000481057 B4E1Z4 1266 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 DNM2P50570 870 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 ZCCHC8Q6NZY4 707 aaKnown RBP8.62□□□□□ -1.03
CBX3-206ENST00000481057 DHX37Q8IY37 1157 aaKnown RBP8.62□□□□□ -1.03
CBX3-206ENST00000481057 PANK1Q8TE04 598 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 IP6K1Q92551 441 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 MFSD3Q96ES6 412 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 UHRF1Q96T88 793 aaPredicted RBP8.62□□□□□ -1.03
CBX3-206ENST00000481057 SGPP1Q9BX95 441 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 CATSPERZQ9NTU4 200 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 COL11A2P13942 1736 aaPredicted RBP8.62□□□□□ -1.03
CBX3-206ENST00000481057 ZDBF2Q9HCK1 2354 aa8.62□□□□□ -1.03
CBX3-206ENST00000481057 KIF7Q2M1P5 1343 aa8.61□□□□□ -1.03
CBX3-206ENST00000481057 COL5A3P25940 1745 aaPredicted RBP8.61□□□□□ -1.03
CBX3-206ENST00000481057 TCRBV5S2A0A599 114 aa8.61□□□□□ -1.03
CBX3-206ENST00000481057 TCRBV5S4A2TA0A5A2 114 aa8.61□□□□□ -1.03
CBX3-206ENST00000481057 GSTA4O15217 222 aa8.61□□□□□ -1.03
CBX3-206ENST00000481057 NPTXRO95502 500 aa8.61□□□□□ -1.03
CBX3-206ENST00000481057 PMLP29590 882 aa8.61□□□□□ -1.03
CBX3-206ENST00000481057 CRKLP46109 303 aaKnown RBP8.61□□□□□ -1.03
CBX3-206ENST00000481057 EPHB3P54753 998 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms