RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ELAC1Q9H777 363 aaKnown RBP22.43■■□□□ 1.18
VPS36-204ENST00000480923 IFT122Q9HBG6 1241 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 PRDM6Q9NQX0 595 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 LMCD1Q9NZU5 365 aa22.43■■□□□ 1.18
VPS36-204ENST00000480923 MRPL42Q9Y6G3 142 aaKnown RBP22.43■■□□□ 1.18
VPS36-204ENST00000480923 VPS37CA5D8V6 355 aaPredicted RBP22.42■■□□□ 1.18
VPS36-204ENST00000480923 TBKBP1A7MCY6 615 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 H3BNC9 293 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 PDCP20941 246 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 BMPR1AP36894 532 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 PDIA5Q14554 519 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 FAM102BQ5T8I3 360 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 DTHD1Q6ZMT9 781 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 SRGAP1Q7Z6B7 1085 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 RNF169Q8NCN4 708 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 CLP1Q92989 425 aaKnown RBP22.42■■□□□ 1.18
VPS36-204ENST00000480923 DACT1Q9NYF0 836 aa22.42■■□□□ 1.18
VPS36-204ENST00000480923 DBR1Q9UK59 544 aaKnown RBP22.42■■□□□ 1.18
VPS36-204ENST00000480923 PIN4Q9Y237 131 aaKnown RBP22.42■■□□□ 1.18
VPS36-204ENST00000480923 COL4A4P53420 1690 aaPredicted RBP22.42■■□□□ 1.18
VPS36-204ENST00000480923 K7ELQ4 463 aaPredicted RBP22.41■■□□□ 1.18
VPS36-204ENST00000480923 RB1P06400 928 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 LINC00271P0C7V0 271 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 FGFR1P11362 822 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 PRPHP41219 470 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 MXD4Q14582 209 aaPredicted RBP22.41■■□□□ 1.18
VPS36-204ENST00000480923 PTPROQ16827 1216 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 ECHDC2Q86YB7 292 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 SNX29Q8TEQ0 813 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 C11orf84Q9BUA3 381 aaPredicted RBP22.41■■□□□ 1.18
VPS36-204ENST00000480923 CHST12Q9NRB3 414 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 STK24Q9Y6E0 443 aa22.41■■□□□ 1.18
VPS36-204ENST00000480923 MYO9BQ13459 2157 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 EYSQ5T1H1 3165 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 ARHGEF35A5YM69 484 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 C5orf67F2Z3F1 127 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 HOXA2O43364 376 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 MUTP22033 750 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 PHKA2P46019 1235 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 TFDP1Q14186 410 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 SPOUT1Q5T280 376 aaKnown RBP22.4■■□□□ 1.18
VPS36-204ENST00000480923 TWF2Q6IBS0 349 aaKnown RBP22.4■■□□□ 1.18
VPS36-204ENST00000480923 MAEAQ7L5Y9 396 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 IGSF22Q8N9C0 903 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 ASAP3Q8TDY4 903 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 FOXD4L1Q9NU39 408 aa22.4■■□□□ 1.18
VPS36-204ENST00000480923 A0A0U1RQF3 1178 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 PP2D1A8MPX8 630 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 ARL2P36404 184 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 ATP2C1P98194 919 aaPredicted RBP22.39■■□□□ 1.17
VPS36-204ENST00000480923 IL17AQ16552 155 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 KRT79Q5XKE5 535 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 BRAPQ7Z569 592 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 ABI1Q8IZP0 508 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 INTS4Q96HW7 963 aaKnown RBP22.39■■□□□ 1.17
VPS36-204ENST00000480923 POLR3FQ9H1D9 316 aaPredicted RBP22.39■■□□□ 1.17
VPS36-204ENST00000480923 MINDY3Q9H8M7 445 aa22.39■■□□□ 1.17
VPS36-204ENST00000480923 ECM1Q16610 540 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 PADI6Q6TGC4 694 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 MCPH1Q8NEM0 835 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 MRPL38Q96DV4 380 aaKnown RBP22.38■■□□□ 1.17
VPS36-204ENST00000480923 PLVAPQ9BX97 442 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 TMEM117Q9H0C3 514 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 GPRC5CQ9NQ84 441 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 DDX19AQ9NUU7 478 aaKnown RBP22.38■■□□□ 1.17
VPS36-204ENST00000480923 THEGQ9P2T0 379 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 KIAA1024Q9UPX6 916 aa22.38■■□□□ 1.17
VPS36-204ENST00000480923 ARID2Q68CP9 1835 aa22.37■■□□□ 1.17
VPS36-204ENST00000480923 GLRA2P23416 452 aa22.37■■□□□ 1.17
VPS36-204ENST00000480923 PTENP60484 403 aa22.37■■□□□ 1.17
VPS36-204ENST00000480923 CAPSQ13938 189 aa22.37■■□□□ 1.17
VPS36-204ENST00000480923 AGPAT5Q9NUQ2 364 aa22.37■■□□□ 1.17
VPS36-204ENST00000480923 RNF19AQ9NV58 838 aa22.37■■□□□ 1.17
VPS36-204ENST00000480923 VWA3AA6NCI4 1184 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 INO80B-WBP1J3KQ70 363 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 ERLIN2O94905 339 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 EOMESO95936 686 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 SKIP12755 728 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 CDC25AP30304 524 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 ZNF598Q86UK7 904 aaKnown RBP22.36■■□□□ 1.17
VPS36-204ENST00000480923 CASD1Q96PB1 797 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 BHMT2Q9H2M3 363 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 AAASQ9NRG9 546 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 FAM105AQ9NUU6 356 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 TYW1Q9NV66 732 aaKnown RBP22.36■■□□□ 1.17
VPS36-204ENST00000480923 HCSTQ9UBK5 93 aa22.36■■□□□ 1.17
VPS36-204ENST00000480923 GRM6O15303 877 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 CSPG5O95196 566 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 ATF7P17544 494 aaPredicted RBP22.35■■□□□ 1.17
VPS36-204ENST00000480923 CYP11B2P19099 503 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 SYT1P21579 422 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 RAB27AP51159 221 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 POU5F1BQ06416 359 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 ZRSR1Q15695 479 aaKnown RBP22.35■■□□□ 1.17
VPS36-204ENST00000480923 TIGD5Q53EQ6 642 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 NAALADL2Q58DX5 795 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 HELQQ8TDG4 1101 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 P2RX5Q93086 422 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 SNX21Q969T3 373 aa22.35■■□□□ 1.17
VPS36-204ENST00000480923 TRAIPQ9BWF2 469 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms