RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 ENPP3O14638 875 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 SPTLC2O15270 562 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 TLL1O43897 1013 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 UPP2O95045 317 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 GJB5O95377 273 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 YEATS4O95619 227 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 CYP11B2P19099 503 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 IBSPP21815 317 aaPredicted RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 GLRA2P23416 452 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 ARL2P36404 184 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 DNM1Q05193 864 aaKnown RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 MXD4Q14582 209 aaPredicted RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 ZNF697Q5TEC3 545 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 RTN4RL1Q86UN2 441 aaPredicted RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 CALML4Q96GE6 196 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 EPSTI1Q96J88 318 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 FAM161BQ96MY7 647 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
CCM2-212ENST00000480382 IFT122Q9HBG6 1241 aa13.4□□□□□ -0.26
CCM2-212ENST00000480382 LCHNA4D1U4 455 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 ASAP2O43150 1006 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 SLC26A4O43511 780 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCM2-212ENST00000480382 CA3P07451 260 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 PLCG1P19174 1290 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 SFPQP23246 707 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCM2-212ENST00000480382 TFDP1Q14186 410 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 DEFB123Q8N688 67 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 LRRC15Q8TF66 581 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 TOP1MTQ969P6 601 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 CHAMP1Q96JM3 812 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 ADAM2Q99965 735 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 RUSC1Q9BVN2 902 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 INO80BQ9C086 356 aaPredicted RBP13.39□□□□□ -0.27
CCM2-212ENST00000480382 MINDY3Q9H8M7 445 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
CCM2-212ENST00000480382 FNDC1Q4ZHG4 1894 aaPredicted RBP13.39□□□□□ -0.27
CCM2-212ENST00000480382 RALGAPA2Q2PPJ7 1873 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 TRANK1O15050 2925 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 TMEM265A0A087WTH1 108 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 LRRIQ4A6NIV6 560 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 ARHGEF15O94989 841 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 PLA2G4BP0C869 781 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 PHKA2P46019 1235 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 DSC3Q14574 896 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 PPP2R2DQ66LE6 453 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 SRGAP1Q7Z6B7 1085 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 BSNDQ8WZ55 320 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 CCSER1Q9C0I3 900 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 SLC28A3Q9HAS3 691 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 RGS18Q9NS28 235 aa13.38□□□□□ -0.27
CCM2-212ENST00000480382 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 HIP1RO75146 1068 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 PPP6R2O75170 966 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 ZSCAN20P17040 1043 aaPredicted RBP13.37□□□□□ -0.27
CCM2-212ENST00000480382 NCLP19338 710 aaKnown RBP13.37□□□□□ -0.27
CCM2-212ENST00000480382 TXLNAP40222 546 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 SARSP49591 514 aaKnown RBP13.37□□□□□ -0.27
CCM2-212ENST00000480382 SLC12A3P55017 1021 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 PTENP60484 403 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 HTRA4P83105 476 aaPredicted RBP13.37□□□□□ -0.27
CCM2-212ENST00000480382 MBTD1Q05BQ5 628 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 C1orf186Q6ZWK4 172 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
CCM2-212ENST00000480382 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 RAD9AQ99638 391 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 ZNF576Q9H609 170 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 C1orf112Q9NSG2 853 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 BLOC1S4Q9NUP1 217 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 AGPAT5Q9NUQ2 364 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 CFAP45Q9UL16 551 aa13.37□□□□□ -0.27
CCM2-212ENST00000480382 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
CCM2-212ENST00000480382 EYSQ5T1H1 3165 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 C9IYK1 514 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 ERLIN2O94905 339 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 DDIT3P35638 169 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 NAMPTP43490 491 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
CCM2-212ENST00000480382 POU5F1BQ06416 359 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 MAPK7Q13164 816 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 DHX8Q14562 1220 aaKnown RBP13.36□□□□□ -0.27
CCM2-212ENST00000480382 MCM6Q14566 821 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 CDCA2Q69YH5 1023 aaPredicted RBP13.36□□□□□ -0.27
CCM2-212ENST00000480382 SLC24A5Q71RS6 500 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 SPRED2Q7Z698 418 aa13.36□□□□□ -0.27
CCM2-212ENST00000480382 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms