RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 HOXC6P09630 235 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 PLS3P13797 630 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
LINC00173-203ENST00000480237 ATP4AP20648 1035 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 MARK3P27448 753 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
LINC00173-203ENST00000480237 DMP1Q13316 513 aaPredicted RBP11.49□□□□□ -0.57
LINC00173-203ENST00000480237 ALCAMQ13740 583 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
LINC00173-203ENST00000480237 CCDC144BQ3MJ40 725 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 ZCWPW2Q504Y3 356 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 HS1BP3Q53T59 392 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 TMEM63BQ5T3F8 832 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 FILIP1Q7Z7B0 1213 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 LAPTM4BQ86VI4 370 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 OR6J1Q8NGC5 347 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 VPS16Q9H269 839 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 KCTD10Q9H3F6 313 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
LINC00173-203ENST00000480237 TYW1Q9NV66 732 aaKnown RBP11.49□□□□□ -0.57
LINC00173-203ENST00000480237 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 N4BP3O15049 544 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 NKRFO15226 690 aaKnown RBP eCLIP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 PTGS1P23219 599 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 RFC5P40937 340 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 PEX3P56589 373 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 EDRF1Q3B7T1 1238 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 DUSP28Q4G0W2 176 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 ZC2HC1CQ53FD0 456 aaPredicted RBP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 OLFML2BQ68BL8 750 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 LRRC55Q6ZSA7 311 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 PLPPR4Q7Z2D5 763 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 APTXQ7Z2E3 356 aaKnown RBP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 IRF2BP1Q8IU81 584 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 VSTM4Q8IW00 320 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 SLC17A8Q8NDX2 589 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 PPTC7Q8NI37 304 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 ZNF507Q8TCN5 953 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 SLC7A3Q8WY07 619 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 USP6NLQ92738 828 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 EMID1Q96A84 441 aaPredicted RBP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 EEF2KMTQ96G04 330 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 IFT74Q96LB3 600 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 CEP63Q96MT8 703 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 NIFKQ9BYG3 293 aaKnown RBP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 POLR3FQ9H1D9 316 aaPredicted RBP11.48□□□□□ -0.57
LINC00173-203ENST00000480237 INTS13Q9NVM9 706 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 NRBP1Q9UHY1 535 aa11.48□□□□□ -0.57
LINC00173-203ENST00000480237 CCDC169A6NNP5 214 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 PDXKO00764 312 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 LGALS2P05162 132 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 SMPD1P17405 629 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 NR2F2P24468 414 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 HOXD13P35453 343 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 PSMC4P43686 418 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 SLC26A2P50443 739 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 SMTNP53814 917 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 LACTBP83111 547 aaPredicted RBP11.47□□□□□ -0.57
LINC00173-203ENST00000480237 TNFAIP2Q03169 654 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 IRF5Q13568 498 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 KIF22Q14807 665 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 CCL14Q16627 93 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 PTPN21Q16825 1174 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 IQSEC1Q6DN90 963 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 HS2ST1Q7LGA3 356 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 ZNF720Q7Z2F6 126 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
LINC00173-203ENST00000480237 SYCP3Q8IZU3 236 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 PXYLP1Q8TE99 480 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 ATP8B4Q8TF62 1192 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 AFG1LQ8WV93 481 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 ZFRQ96KR1 1074 aaKnown RBP11.47□□□□□ -0.57
LINC00173-203ENST00000480237 FIZ1Q96SL8 496 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 TUBGCP2Q9BSJ2 902 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 C17orf75Q9HAS0 396 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 XPNPEP1Q9NQW7 623 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 IMPACTQ9P2X3 320 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 CENPFP49454 3210 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 PCNTO95613 3336 aa11.47□□□□□ -0.57
LINC00173-203ENST00000480237 LGALS16A8MUM7 142 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 CETN3O15182 167 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 SLC16A4O15374 487 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 NR3C1P04150 777 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 CTGFP29279 349 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 CYP2C19P33261 490 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 NCKAP1LP55160 1127 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 SOX10P56693 466 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 GSDMDP57764 484 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 TBC1D8BQ0IIM8 1120 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 NR1I3Q14994 352 aa11.46□□□□□ -0.57
LINC00173-203ENST00000480237 PLCB4Q15147 1175 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms