RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ABCD1P33897 745 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 LAMTOR4Q0VGL1 99 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 ALCAMQ13740 583 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 CAPSQ13938 189 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 MORC3Q14149 939 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 TFDP1Q14186 410 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 TRIM71Q2Q1W2 868 aaKnown RBP13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 ODR4Q5SWX8 454 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 MAEAQ7L5Y9 396 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 RSPH3Q86UC2 560 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 CAGE1Q8TC20 777 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 ERCC4Q92889 916 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZBTB10Q96DT7 871 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 ARHGAP28Q9P2N2 729 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 MAN1B1Q9UKM7 699 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 UBE4BO95155 1302 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 PHLPP2Q6ZVD8 1323 aa13.86□□□□□ -0.19
TRAPPC12-218ENST00000479897 PPP1R37O75864 691 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 EN2P19622 333 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 NPTX2P47972 431 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 GPC3P51654 580 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 SMTNP53814 917 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 HERC4Q5GLZ8 1057 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZNF658Q5TYW1 1059 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM178BQ8IXR5 827 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 WNT8BQ93098 351 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 HVCN1Q96D96 273 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 STRA6Q9BX79 667 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 C2orf40Q9H1Z8 148 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 NOD1Q9Y239 953 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 AKT3Q9Y243 479 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 ADGRA3Q8IWK6 1321 aa13.85□□□□□ -0.19
TRAPPC12-218ENST00000479897 SFI1A8K8P3 1242 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 EIF3DO15371 548 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 GPR32O75388 356 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 VTNP04004 478 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 ATN1P54259 1190 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 PEX3P56589 373 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 PTENP60484 403 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 MRPS6P82932 125 aaKnown RBP13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 MGAT3Q09327 533 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 PCBP1Q15365 356 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 BMT2Q1RMZ1 405 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 TRIM60Q495X7 471 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM26DQ5JW98 314 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 EPM2AIP1Q7L775 607 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZNF720Q7Z2F6 126 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 RHPN2Q8IUC4 686 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 KIAA0895Q8NCT3 520 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 TMEM161BQ8NDZ6 487 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 DNAJB3Q8WWF6 145 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 FAM49AQ9H0Q0 323 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 TRPV6Q9H1D0 765 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 ADAMTS10Q9H324 1103 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 ZHX3Q9H4I2 956 aa13.84□□□□□ -0.19
TRAPPC12-218ENST00000479897 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 K7ENM7 598 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 BMP6P22004 513 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 PPP1R2P41236 205 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 PHKA2P46019 1235 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 EFNA5P52803 228 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 GTF2BQ00403 316 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 STK4Q13043 487 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 LRRC26Q2I0M4 334 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 STXBP4Q6ZWJ1 553 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 RNF149Q8NC42 400 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 FUCA2Q9BTY2 467 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 FGFBP2Q9BYJ0 223 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 TMEM134Q9H6X4 195 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 MRPL44Q9H9J2 332 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 IFT122Q9HBG6 1241 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 POLD4Q9HCU8 107 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 KMT5AQ9NQR1 393 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 TRPV2Q9Y5S1 764 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 SQORQ9Y6N5 450 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 DNAH12Q6ZR08 3092 aa13.83□□□□□ -0.2
TRAPPC12-218ENST00000479897 M0QZ92 97 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 SLC16A4O15374 487 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 PQBP1O60828 265 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 KIF20AO95235 890 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 NMT1P30419 496 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 CASP5P51878 434 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 CRYBB1P53674 252 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 NLRP12P59046 1061 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 TLE2Q04725 743 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 BFSP2Q13515 415 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 STX1AQ16623 288 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 FAM187BQ17R55 369 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
TRAPPC12-218ENST00000479897 HAUS6Q7Z4H7 955 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms