RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, human

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRIK3-204	ENST00000479620	GLRA2	P23416	452 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	UBA7	P41226	1012 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	PTEN	P60484	403 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	GRIN1	Q05586	938 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	PKP1	Q13835	747 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	TFDP1	Q14186	410 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	TMEM119	Q4V9L6	283 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	ATL3	Q6DD88	541 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	SLC24A5	Q71RS6	500 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	KCNK18	Q7Z418	384 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	RNF149	Q8NC42	400 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	ASAP3	Q8TDY4	903 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	NFKBIZ	Q9BYH8	718 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	CHST12	Q9NRB3	414 aa		18.86	■□□□□ 0.61
GRIK3-204	ENST00000479620	DENND3	A2RUS2	1198 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620		C9IYK1	514 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	CSDE1	O75534	798 aa	Known RBP	18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	UPP2	O95045	317 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	ZSCAN20	P17040	1043 aa	Predicted RBP	18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	MARCKS	P29966	332 aa	Predicted RBP	18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	SARS	P49591	514 aa	Known RBP	18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	TAP1	Q03518	808 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	CEBPZ	Q03701	1054 aa	Known RBP	18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	PPP2R2D	Q66LE6	453 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	FAM117B	Q6P1L5	589 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	NPAS4	Q8IUM7	802 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	LINC00301	Q8NCQ3	95 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	CCSER1	Q9C0I3	900 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	COL4A6	Q14031	1691 aa		18.85	■□□□□ 0.61
GRIK3-204	ENST00000479620	MYH15	Q9Y2K3	1946 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	LCHN	A4D1U4	455 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	BRD1	O95696	1058 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	STAG3L1	P0CL83	205 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	FGFR4	P22455	802 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	PHKA2	P46019	1235 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	CAPS	Q13938	189 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	SYT2	Q8N9I0	419 aa	Predicted RBP	18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	ZNF689	Q96CS4	500 aa	Predicted RBP	18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	CALML4	Q96GE6	196 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	CDK5RAP3	Q96JB5	506 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	GUCD1	Q96NT3	240 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	TRAIP	Q9BWF2	469 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	CSRNP2	Q9H175	543 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	ELAC1	Q9H777	363 aa	Known RBP	18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	MINDY3	Q9H8M7	445 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	RC3H2	Q9HBD1	1191 aa	Known RBP	18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	GPRC5C	Q9NQ84	441 aa		18.84	■□□□□ 0.61
GRIK3-204	ENST00000479620	DGKI	O75912	1065 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	YEATS4	O95619	227 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	GRIN2C	Q14957	1233 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	ZRSR1	Q15695	479 aa	Known RBP	18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	FAM102B	Q5T8I3	360 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	C1orf186	Q6ZWK4	172 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	CATSPER4	Q7RTX7	472 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	KRI1	Q8N9T8	703 aa	Known RBP	18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	KIFAP3	Q92845	792 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	FAM161B	Q96MY7	647 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	YME1L1	Q96TA2	773 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	DACT1	Q9NYF0	836 aa		18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620	TFIP11	Q9UBB9	837 aa	Known RBP	18.83	■□□□□ 0.6
GRIK3-204	ENST00000479620		A0A0U1RQF3	1178 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	LINC01553	A4QN01	128 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	PPP6R2	O75170	966 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	ARHGEF15	O94989	841 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	SLC34A2	O95436	690 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	STK38	Q15208	465 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	RINT1	Q6NUQ1	792 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	MAEA	Q7L5Y9	396 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	EPSTI1	Q96J88	318 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	CDX2	Q99626	313 aa	Predicted RBP	18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	TIPIN	Q9BVW5	301 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	AGPAT5	Q9NUQ2	364 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	TMEM161A	Q9NX61	479 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	KCND2	Q9NZV8	630 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	ZDHHC9	Q9Y397	364 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	PCDHB7	Q9Y5E2	793 aa		18.82	■□□□□ 0.6
GRIK3-204	ENST00000479620	SPTLC2	O15270	562 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	PLA2G4B	P0C869	781 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	GUCY2C	P25092	1073 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	HOXA11	P31270	313 aa	Predicted RBP	18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	SLC12A3	P55017	1021 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	ERVK-21	P61565	698 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	MBTD1	Q05BQ5	628 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	PPP2R5A	Q15172	486 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	USP49	Q70CQ1	688 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	CLIC6	Q96NY7	704 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	PLIN2	Q99541	437 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	RUSC1	Q9BVN2	902 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	LRFN2	Q9ULH4	789 aa		18.81	■□□□□ 0.6
GRIK3-204	ENST00000479620	COL6A3	P12111	3177 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	EOMES	O95936	686 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	AXL	P30530	894 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	NAMPT	P43490	491 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	KARS	Q15046	597 aa	Known RBP	18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	ECHDC2	Q86YB7	292 aa		18.8	■□□□□ 0.6

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