RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ZFHX4Q86UP3 3567 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 CCDC69A6NI79 296 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 IGHDP01880 384 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 SREBF1P36956 1147 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 SPECC1Q5M775 1068 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 PPFIBP1Q86W92 1011 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 RUBCNQ92622 972 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 RWDD1Q9H446 243 aaPredicted RBP19.66■□□□□ 0.74
HMGN1-212ENST00000479586 NRDE2Q9H7Z3 1164 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 TBC1D17Q9HA65 648 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 RIC8AQ9NPQ8 531 aa19.66■□□□□ 0.74
HMGN1-212ENST00000479586 FAM86B1E9PN63 330 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 MAGEB2O15479 319 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 CSDE1O75534 798 aaKnown RBP19.65■□□□□ 0.74
HMGN1-212ENST00000479586 FOSP01100 380 aaPredicted RBP19.65■□□□□ 0.74
HMGN1-212ENST00000479586 DCNP07585 359 aaKnown RBP19.65■□□□□ 0.74
HMGN1-212ENST00000479586 FAM86B2P0C5J1 330 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 SP9P0CG40 484 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 DARSP14868 501 aaKnown RBP19.65■□□□□ 0.74
HMGN1-212ENST00000479586 GSPT1P15170 499 aaKnown RBP19.65■□□□□ 0.74
HMGN1-212ENST00000479586 ZNF76P36508 570 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 CLCN4P51793 760 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 NAPAP54920 295 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 LONRF3Q496Y0 759 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 NIPA1Q7RTP0 329 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 PLA2G4DQ86XP0 818 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 LPPQ93052 612 aa19.65■□□□□ 0.74
HMGN1-212ENST00000479586 IPO5O00410 1097 aaKnown RBP19.64■□□□□ 0.73
HMGN1-212ENST00000479586 SSBP05455 408 aaKnown RBP eCLIP19.64■□□□□ 0.73
HMGN1-212ENST00000479586 GALTP07902 379 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 CALM1P0DP23 149 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 CALM2P0DP24 149 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 CALM3P0DP25 149 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 KLRC2P26717 231 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 GPC3P51654 580 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 ADCY7P51828 1080 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 TBC1D8BQ0IIM8 1120 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 ZC3H14Q6PJT7 736 aaKnown RBP19.64■□□□□ 0.73
HMGN1-212ENST00000479586 C15orf39Q6ZRI6 1047 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 SCLT1Q96NL6 688 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 KLHL5Q96PQ7 755 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 TBC1D13Q9NVG8 400 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 DACT1Q9NYF0 836 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 GABBR1Q9UBS5 961 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 DNAJB4Q9UDY4 337 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 CEP131Q9UPN4 1083 aa19.64■□□□□ 0.73
HMGN1-212ENST00000479586 CACNA1IQ9P0X4 2223 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 CNTNAP5Q8WYK1 1306 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 IGLV3-22A0A075B6J6 115 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 MEIS3P2A8K0S8 358 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 B4GALT3O60512 393 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 CNPP09543 421 aaKnown RBP19.63■□□□□ 0.73
HMGN1-212ENST00000479586 TMOD1P28289 359 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 SLC11A1P49279 550 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 RSPO4Q2I0M5 234 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-212ENST00000479586 RUFY2Q8WXA3 655 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 MTA3Q9BTC8 594 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 DLGAP2Q9P1A6 1054 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 INPP5FQ9Y2H2 1132 aa19.63■□□□□ 0.73
HMGN1-212ENST00000479586 CHMLP26374 656 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 GBP2P32456 591 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-212ENST00000479586 PHKA2P46019 1235 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 CLK2P49760 499 aaKnown RBP19.62■□□□□ 0.73
HMGN1-212ENST00000479586 ZNF746Q6NUN9 644 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-212ENST00000479586 TMTC2Q8N394 836 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 SLC44A3Q8N4M1 653 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 FANCBQ8NB91 859 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 NLRP7Q8WX94 980 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 TMEM87BQ96K49 555 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 ZNF577Q9BSK1 485 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 EMILIN2Q9BXX0 1053 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 GBP3Q9H0R5 595 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 SLC12A7Q9Y666 1083 aa19.62■□□□□ 0.73
HMGN1-212ENST00000479586 DOCK8Q8NF50 2099 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 PSAPP07602 524 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 SRFP11831 508 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 MCM5P33992 734 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 RNASELQ05823 741 aaKnown RBP19.61■□□□□ 0.73
HMGN1-212ENST00000479586 AP3B2Q13367 1082 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 NOMO2Q5JPE7 1267 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 PPP1R18Q6NYC8 613 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 MICU3Q86XE3 530 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 C1orf210Q8IVY1 113 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 ZNF710Q8N1W2 664 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 SUMF1Q8NBK3 374 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 GPR152Q8TDT2 470 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 MYADMQ96S97 322 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 LRRC2Q9BYS8 371 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 MAN1C1Q9NR34 630 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 EPS15L1Q9UBC2 864 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 PCDHA10Q9Y5I2 948 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 RBM8AQ9Y5S9 174 aaKnown RBP19.61■□□□□ 0.73
HMGN1-212ENST00000479586 WDR81Q562E7 1941 aa19.61■□□□□ 0.73
HMGN1-212ENST00000479586 SMCO2A6NFE2 343 aa19.6■□□□□ 0.73
HMGN1-212ENST00000479586 POTEMA6NI47 508 aa19.6■□□□□ 0.73
HMGN1-212ENST00000479586 ZNF862O60290 1169 aa19.6■□□□□ 0.73
HMGN1-212ENST00000479586 LIFRP42702 1097 aa19.6■□□□□ 0.73
HMGN1-212ENST00000479586 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.73
HMGN1-212ENST00000479586 TTC22Q5TAA0 569 aa19.6■□□□□ 0.73
HMGN1-212ENST00000479586 POTEGQ6S5H5 508 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms