RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ZNF720Q7Z2F6 126 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 UBE2Q1Q7Z7E8 422 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 SERINC5Q86VE9 423 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 SPIRE2Q8WWL2 714 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 KCNN1Q92952 543 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 GLT1D1Q96MS3 346 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 PPP1R16BQ96T49 567 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 OSBPL7Q9BZF2 842 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 ADAMTS10Q9H324 1103 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 RMND1Q9NWS8 449 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 SEL1LQ9UBV2 794 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 MAPK8IP1Q9UQF2 711 aa14.48□□□□□ -0.09
CHD3-210ENST00000479080 B4GALT4O60513 344 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 GPR32O75388 356 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 PRPF6O94906 941 aaKnown RBP14.47□□□□□ -0.09
CHD3-210ENST00000479080 TFRCP02786 760 aaKnown RBP14.47□□□□□ -0.09
CHD3-210ENST00000479080 GPC3P51654 580 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 PTPN11Q06124 597 aaPredicted RBP14.47□□□□□ -0.09
CHD3-210ENST00000479080 PSMD2Q13200 908 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 BMT2Q1RMZ1 405 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 TRAF7Q6Q0C0 670 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 SASS6Q6UVJ0 657 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 METTL13Q8N6R0 699 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 DNAJB3Q8WWF6 145 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 TCP11Q8WWU5 503 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 PSPC1Q8WXF1 523 aaKnown RBP14.47□□□□□ -0.09
CHD3-210ENST00000479080 JPH2Q9BR39 696 aaPredicted RBP14.47□□□□□ -0.09
CHD3-210ENST00000479080 NTPCRQ9BSD7 190 aaKnown RBP14.47□□□□□ -0.09
CHD3-210ENST00000479080 CCDC113Q9H0I3 377 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 FAM49AQ9H0Q0 323 aaPredicted RBP14.47□□□□□ -0.09
CHD3-210ENST00000479080 TRPV6Q9H1D0 765 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 SEMA6BQ9H3T3 888 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 ST6GALNAC4Q9H4F1 302 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 MINDY3Q9H8M7 445 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 CDHR5Q9HBB8 845 aa14.47□□□□□ -0.09
CHD3-210ENST00000479080 TRIP12Q14669 1992 aaPredicted RBP14.46□□□□□ -0.09
CHD3-210ENST00000479080 TTLL13PA6NNM8 815 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 K7ENM7 598 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 CCDC192P0DO97 292 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 MAPTP10636 758 aaKnown RBP14.46□□□□□ -0.09
CHD3-210ENST00000479080 NAMPTP43490 491 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 GTF2BQ00403 316 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 MGAT3Q09327 533 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 TMEM62Q0P6H9 643 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 SNX17Q15036 470 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 ZCWPW2Q504Y3 356 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 RHPN2Q8IUC4 686 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 FAM178BQ8IXR5 827 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 FAM126BQ8IXS8 530 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 ANKLE1Q8NAG6 615 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 RETREG2Q8NC44 543 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 ZNF507Q8TCN5 953 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 SENP6Q9GZR1 1112 aaPredicted RBP14.46□□□□□ -0.09
CHD3-210ENST00000479080 KCTD10Q9H3F6 313 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 MRPL44Q9H9J2 332 aaKnown RBP14.46□□□□□ -0.09
CHD3-210ENST00000479080 C17orf75Q9HAS0 396 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 IFT122Q9HBG6 1241 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 ANO10Q9NW15 660 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 LARSQ9P2J5 1176 aaKnown RBP14.46□□□□□ -0.09
CHD3-210ENST00000479080 USP20Q9Y2K6 914 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
CHD3-210ENST00000479080 A0A087WZ62 844 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 TRIM49BA6NDI0 452 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 TISP43B9A030 160 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 TGFB1I1O43294 461 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 GCNT3O95395 438 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 CD4P01730 458 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 IQCF3P0C7M6 154 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 EN2P19622 333 aaPredicted RBP14.45□□□□□ -0.1
CHD3-210ENST00000479080 DMP1Q13316 513 aaPredicted RBP14.45□□□□□ -0.1
CHD3-210ENST00000479080 NCAPHQ15003 741 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 IQCB1Q15051 598 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 PTGISQ16647 500 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 AMHR2Q16671 573 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 SLC39A4Q6P5W5 647 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 HAUS6Q7Z4H7 955 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
CHD3-210ENST00000479080 NELFCDQ8IXH7 590 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 EXOC8Q8IYI6 725 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 GUF1Q8N442 669 aaKnown RBP14.45□□□□□ -0.1
CHD3-210ENST00000479080 MLKLQ8NB16 471 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 TMEM40Q8WWA1 233 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 VTI1AQ96AJ9 217 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 PAWRQ96IZ0 340 aaKnown RBP14.45□□□□□ -0.1
CHD3-210ENST00000479080 DUSP9Q99956 384 aaKnown RBP14.45□□□□□ -0.1
CHD3-210ENST00000479080 FDXACB1Q9BRP7 624 aaPredicted RBP14.45□□□□□ -0.1
CHD3-210ENST00000479080 TSPY26PQ9H489 355 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 KMT5AQ9NQR1 393 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 CTNND2Q9UQB3 1225 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 AKT3Q9Y243 479 aa14.45□□□□□ -0.1
CHD3-210ENST00000479080 DENND3A2RUS2 1198 aa14.44□□□□□ -0.1
CHD3-210ENST00000479080 LRRIQ4A6NIV6 560 aa14.44□□□□□ -0.1
CHD3-210ENST00000479080 CCDC169A6NNP5 214 aa14.44□□□□□ -0.1
CHD3-210ENST00000479080 EIF3DO15371 548 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHD3-210ENST00000479080 CSDE1O75534 798 aaKnown RBP14.44□□□□□ -0.1
CHD3-210ENST00000479080 SRGAP2CP0DJJ0 459 aa14.44□□□□□ -0.1
CHD3-210ENST00000479080 GNAT1P11488 350 aa14.44□□□□□ -0.1
CHD3-210ENST00000479080 ATN1P54259 1190 aaPredicted RBP14.44□□□□□ -0.1
CHD3-210ENST00000479080 STX17P56962 302 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms