RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SLC28A3Q9HAS3 691 aa22.73■■□□□ 1.23
VARS-224ENST00000479051 PPP6R2O75170 966 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 UPP2O95045 317 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 SSBP05455 408 aaKnown RBP eCLIP22.72■■□□□ 1.23
VARS-224ENST00000479051 STAG3L1P0CL83 205 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 POU5F1BQ06416 359 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 TMEM119Q4V9L6 283 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 FAM117BQ6P1L5 589 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 CATSPER4Q7RTX7 472 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 KCNG4Q8TDN1 519 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 ASAP3Q8TDY4 903 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 PLIN2Q99541 437 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 ADAM2Q99965 735 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 INSL6Q9Y581 213 aa22.72■■□□□ 1.23
VARS-224ENST00000479051 PPP2R5AQ15172 486 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 PCBP1Q15365 356 aaKnown RBP eCLIP22.71■■□□□ 1.236e-7■■■■□ 21.8
VARS-224ENST00000479051 TMCO2Q7Z6W1 182 aaPredicted RBP22.71■■□□□ 1.23
VARS-224ENST00000479051 LINC01599Q8WXQ3 324 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 KIFAP3Q92845 792 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 IFT74Q96LB3 600 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 CLIC6Q96NY7 704 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 TIPINQ9BVW5 301 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 NKX2-4Q9H2Z4 354 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 IFT122Q9HBG6 1241 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 DACT1Q9NYF0 836 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 LRFN2Q9ULH4 789 aa22.71■■□□□ 1.23
VARS-224ENST00000479051 YBX2Q9Y2T7 364 aaKnown RBP22.71■■□□□ 1.23
VARS-224ENST00000479051 CSDE1O75534 798 aaKnown RBP22.7■■□□□ 1.22
VARS-224ENST00000479051 PLA2G4BP0C869 781 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 FGFR4P22455 802 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 GLRA2P23416 452 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 ANP32AP39687 249 aaKnown RBP22.7■■□□□ 1.22
VARS-224ENST00000479051 SARSP49591 514 aaKnown RBP22.7■■□□□ 1.22
VARS-224ENST00000479051 PTENP60484 403 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 NCBP1Q09161 790 aaKnown RBP22.7■■□□□ 1.22
VARS-224ENST00000479051 CAPSQ13938 189 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 KARSQ15046 597 aaKnown RBP22.7■■□□□ 1.22
VARS-224ENST00000479051 PPP2R2DQ66LE6 453 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 SLC24A5Q71RS6 500 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 KCNK18Q7Z418 384 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 NPAS4Q8IUM7 802 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 DEFB123Q8N688 67 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 SYT2Q8N9I0 419 aaPredicted RBP22.7■■□□□ 1.22
VARS-224ENST00000479051 SYMPKQ92797 1274 aaKnown RBP22.7■■□□□ 1.22
VARS-224ENST00000479051 YME1L1Q96TA2 773 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 NFKBIZQ9BYH8 718 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 GPRC5CQ9NQ84 441 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 CHST12Q9NRB3 414 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 RGS18Q9NS28 235 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 KCND2Q9NZV8 630 aa22.7■■□□□ 1.22
VARS-224ENST00000479051 LRRIQ4A6NIV6 560 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 RBAK-RBAKDNI3L0D1 243 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 MGEA5O60502 916 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 ERLIN2O94905 339 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 CA3P07451 260 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 MYOGP15173 224 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 PLCG1P19174 1290 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 NUCB2P80303 420 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 DNM1Q05193 864 aaKnown RBP22.69■■□□□ 1.22
VARS-224ENST00000479051 SPECC1Q5M775 1068 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 RINT1Q6NUQ1 792 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 RTN4RL1Q86UN2 441 aaPredicted RBP22.69■■□□□ 1.22
VARS-224ENST00000479051 IFNLR1Q8IU57 520 aaPredicted RBP22.69■■□□□ 1.22
VARS-224ENST00000479051 ZBTB8OSQ8IWT0 167 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 EPSTI1Q96J88 318 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 DRC1Q96MC2 740 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 C2orf40Q9H1Z8 148 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 ZNF576Q9H609 170 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 LAMA3Q16787 3333 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 PTPRSQ13332 1948 aa22.69■■□□□ 1.22
VARS-224ENST00000479051 GBF1Q92538 1859 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 INO80B-WBP1J3KQ70 363 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 CUTAO60888 179 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 NCLP19338 710 aaKnown RBP22.68■■□□□ 1.22
VARS-224ENST00000479051 IBSPP21815 317 aaPredicted RBP22.68■■□□□ 1.22
VARS-224ENST00000479051 KRT85P78386 507 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 HTRA4P83105 476 aaPredicted RBP22.68■■□□□ 1.22
VARS-224ENST00000479051 DSC3Q14574 896 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 DEPTORQ8TB45 409 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 SEMA6BQ9H3T3 888 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 STK17AQ9UEE5 414 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 PIN4Q9Y237 131 aaKnown RBP22.68■■□□□ 1.22
VARS-224ENST00000479051 PCDHB7Q9Y5E2 793 aa22.68■■□□□ 1.22
VARS-224ENST00000479051 GUCY2CP25092 1073 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 NAMPTP43490 491 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 SLC12A3P55017 1021 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 RRAGBQ5VZM2 374 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 CCDC73Q6ZRK6 1079 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 RUSC1Q9BVN2 902 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 AGPAT5Q9NUQ2 364 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 KCNG1Q9UIX4 513 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 ZDHHC9Q9Y397 364 aa22.67■■□□□ 1.22
VARS-224ENST00000479051 LAMA2P24043 3122 aaKnown RBP22.67■■□□□ 1.22
VARS-224ENST00000479051 TTC3P53804 2025 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 C9IYK1 514 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 HIP1RO75146 1068 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 SKIP12755 728 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 AXLP30530 894 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 ME1P48163 572 aa22.66■■□□□ 1.22
VARS-224ENST00000479051 TWF2Q6IBS0 349 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms