RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 STAG3L1P0CL83 205 aa20.95■□□□□ 0.94
SREBF1-212ENST00000478616 ARL2P36404 184 aa20.95■□□□□ 0.94
SREBF1-212ENST00000478616 POLGP54098 1239 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-212ENST00000478616 LAMTOR4Q0VGL1 99 aa20.95■□□□□ 0.94
SREBF1-212ENST00000478616 IL27Q8NEV9 243 aa20.95■□□□□ 0.94
SREBF1-212ENST00000478616 NEK9Q8TD19 979 aa20.95■□□□□ 0.94
SREBF1-212ENST00000478616 GCOM2Q9BZD3 368 aaPredicted RBP20.95■□□□□ 0.94
SREBF1-212ENST00000478616 UPF2Q9HAU5 1272 aaKnown RBP20.95■□□□□ 0.94
SREBF1-212ENST00000478616 PCDHB7Q9Y5E2 793 aa20.95■□□□□ 0.94
SREBF1-212ENST00000478616 A0A0U1RQF3 1178 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 ITGB1P05556 798 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 RB1P06400 928 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 HOXA11P31270 313 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-212ENST00000478616 FXR2P51116 673 aaKnown RBP eCLIP20.94■□□□□ 0.94
SREBF1-212ENST00000478616 COL19A1Q14993 1142 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 ODR4Q5SWX8 454 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 POTEGQ6S5H5 508 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 SLC7A3Q8WY07 619 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 POLR3CQ9BUI4 534 aaPredicted RBP20.94■□□□□ 0.94
SREBF1-212ENST00000478616 ALG13Q9NP73 1137 aaKnown RBP20.94■□□□□ 0.94
SREBF1-212ENST00000478616 PLAGL2Q9UPG8 496 aa20.94■□□□□ 0.94
SREBF1-212ENST00000478616 MCM2P49736 904 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 DNM2P50570 870 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 KCNQ1P51787 676 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 PTGDRQ13258 359 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 UBXN11Q5T124 520 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 OTUD6AQ7L8S5 288 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 IGSF22Q8N9C0 903 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 SPPL3Q8TCT6 385 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 ATXN2LQ8WWM7 1075 aaKnown RBP20.93■□□□□ 0.94
SREBF1-212ENST00000478616 ASB2Q96Q27 587 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 MTRQ99707 1265 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 JPH2Q9BR39 696 aaPredicted RBP20.93■□□□□ 0.94
SREBF1-212ENST00000478616 TRAIPQ9BWF2 469 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 TUFT1Q9NNX1 390 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 GPRC5CQ9NQ84 441 aa20.93■□□□□ 0.94
SREBF1-212ENST00000478616 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-212ENST00000478616 TBKBP1A7MCY6 615 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 PP2D1A8MPX8 630 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 SRGAP2CP0DJJ0 459 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 XRCC6P12956 609 aaKnown RBP eCLIP20.92■□□□□ 0.94
SREBF1-212ENST00000478616 BMP1P13497 986 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 GLRA2P23416 452 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 RPA1P27694 616 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 CDC42EP1Q00587 391 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 CAPSQ13938 189 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 AMHR2Q16671 573 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 IFNLR1Q8IU57 520 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-212ENST00000478616 KLHL23Q8NBE8 558 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 PSPC1Q8WXF1 523 aaKnown RBP20.92■□□□□ 0.94
SREBF1-212ENST00000478616 P2RX5Q93086 422 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 SCLT1Q96NL6 688 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 MMTAG2Q9BU76 263 aaKnown RBP20.92■□□□□ 0.94
SREBF1-212ENST00000478616 AGPAT5Q9NUQ2 364 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 TYW1Q9NV66 732 aaKnown RBP20.92■□□□□ 0.94
SREBF1-212ENST00000478616 LRFN2Q9ULH4 789 aa20.92■□□□□ 0.94
SREBF1-212ENST00000478616 IRS1P35568 1242 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 PHKA2P46019 1235 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 PTENP60484 403 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 TCEAL5Q5H9L2 206 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 TJAP1Q5JTD0 557 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 RNF149Q8NC42 400 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 LPPQ93052 612 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 PLVAPQ9BX97 442 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 ATP6V0A4Q9HBG4 840 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 CHST12Q9NRB3 414 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 DBR1Q9UK59 544 aaKnown RBP20.91■□□□□ 0.94
SREBF1-212ENST00000478616 PCDHGC5Q9Y5F6 944 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
SREBF1-212ENST00000478616 BDP1A6H8Y1 2624 aa20.9■□□□□ 0.94
SREBF1-212ENST00000478616 B4GALT3O60512 393 aa20.9■□□□□ 0.94
SREBF1-212ENST00000478616 DGAT1O75907 488 aa20.9■□□□□ 0.94
SREBF1-212ENST00000478616 CDC25AP30304 524 aa20.9■□□□□ 0.94
SREBF1-212ENST00000478616 BSNDQ8WZ55 320 aa20.9■□□□□ 0.94
SREBF1-212ENST00000478616 C11orf84Q9BUA3 381 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-212ENST00000478616 TMEM117Q9H0C3 514 aa20.9■□□□□ 0.94
SREBF1-212ENST00000478616 NOL7Q9UMY1 257 aaKnown RBP20.9■□□□□ 0.94
SREBF1-212ENST00000478616 RWDD3Q9Y3V2 267 aa20.9■□□□□ 0.94
SREBF1-212ENST00000478616 GAS2O43903 313 aaKnown RBP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 USO1O60763 962 aaKnown RBP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 EDN1P05305 212 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 ZSCAN20P17040 1043 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 SFPQP23246 707 aaKnown RBP eCLIP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 GTF2F1P35269 517 aaKnown RBP eCLIP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 AFF1P51825 1210 aaKnown RBP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 MRPS5P82675 430 aaKnown RBP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 MBTD1Q05BQ5 628 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 GNL2Q13823 731 aaKnown RBP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 CATSPER4Q7RTX7 472 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 KCNK18Q7Z418 384 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 SRGAP1Q7Z6B7 1085 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 COLGALT1Q8NBJ5 622 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 TCP11Q8WWU5 503 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 SMC3Q9UQE7 1217 aa20.89■□□□□ 0.93
SREBF1-212ENST00000478616 PIN4Q9Y237 131 aaKnown RBP20.89■□□□□ 0.93
SREBF1-212ENST00000478616 ASAP2O43150 1006 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 TSPAN1O60635 241 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 ZNF623O75123 536 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 LTBRP36941 435 aa20.88■□□□□ 0.93
SREBF1-212ENST00000478616 PBX3P40426 434 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms