RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PCDHA1Q9Y5I3 950 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 KDM3AQ9Y4C1 1321 aa16.4■□□□□ 0.22
USP11-207ENST00000478596 SPTLC1O15269 473 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 FIBPO43427 364 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 RFX1P22670 979 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
USP11-207ENST00000478596 FUT2Q10981 343 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
USP11-207ENST00000478596 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
USP11-207ENST00000478596 SLC35G1Q2M3R5 365 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 WWC2Q6AWC2 1192 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 KCNT2Q6UVM3 1135 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 SLC24A5Q71RS6 500 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 COL26A1Q96A83 441 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 FAM49AQ9H0Q0 323 aaPredicted RBP16.39■□□□□ 0.21
USP11-207ENST00000478596 TBC1D17Q9HA65 648 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 RGS18Q9NS28 235 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 ERAP1Q9NZ08 941 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
USP11-207ENST00000478596 C9IYK1 514 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 H3BQV1 296 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 NARSO43776 548 aaKnown RBP16.38■□□□□ 0.21
USP11-207ENST00000478596 MGEA5O60502 916 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
USP11-207ENST00000478596 ZNF528Q3MIS6 628 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 PPP1R18Q6NYC8 613 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 CCDC149Q6ZUS6 474 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 INTS4Q96HW7 963 aaKnown RBP16.38■□□□□ 0.21
USP11-207ENST00000478596 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
USP11-207ENST00000478596 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 SIT1Q9Y3P8 196 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 FRMPD4Q14CM0 1322 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 FASNP49327 2511 aaKnown RBP16.38■□□□□ 0.21
USP11-207ENST00000478596 ASPMQ8IZT6 3477 aa16.38■□□□□ 0.21
USP11-207ENST00000478596 RRN3P2A6NIE6 340 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 DCNP07585 359 aaKnown RBP16.37■□□□□ 0.21
USP11-207ENST00000478596 CFHP08603 1231 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 IBSPP21815 317 aaPredicted RBP16.37■□□□□ 0.21
USP11-207ENST00000478596 ADCY7P51828 1080 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 NLRP5P59047 1200 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 SPECC1Q5M775 1068 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 KANK3Q6NY19 840 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 MAML2Q8IZL2 1156 aaPredicted RBP16.37■□□□□ 0.21
USP11-207ENST00000478596 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 CUL5Q93034 780 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 SECISBP2LQ93073 1101 aaKnown RBP16.37■□□□□ 0.21
USP11-207ENST00000478596 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 ZNF558Q96NG5 402 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 TMEM161AQ9NX61 479 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 SPG21Q9NZD8 308 aa16.37■□□□□ 0.21
USP11-207ENST00000478596 FNDC1Q4ZHG4 1894 aaPredicted RBP16.37■□□□□ 0.21
USP11-207ENST00000478596 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
USP11-207ENST00000478596 GCOM1H8Y6P7 765 aaPredicted RBP16.36■□□□□ 0.21
USP11-207ENST00000478596 PPP1R11O60927 126 aaPredicted RBP16.36■□□□□ 0.21
USP11-207ENST00000478596 POLR2MP0CAP2 368 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 PDCP20941 246 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 TGM1P22735 817 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 FAM189BP81408 668 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 SP4Q02446 784 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 TMEM62Q0P6H9 643 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 TMEM266Q2M3C6 531 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 LRRC55Q6ZSA7 311 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 GPR149Q86SP6 731 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 GIMAP8Q8ND71 665 aaPredicted RBP16.36■□□□□ 0.21
USP11-207ENST00000478596 AIFM3Q96NN9 605 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 ADAM2Q99965 735 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 TMEM117Q9H0C3 514 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 ELAC1Q9H777 363 aaKnown RBP16.36■□□□□ 0.21
USP11-207ENST00000478596 ATP6V0A4Q9HBG4 840 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 BARHL2Q9NY43 387 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
USP11-207ENST00000478596 DENND3A2RUS2 1198 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 FGFR1P11362 822 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 MARK3P27448 753 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 DMWDQ09019 674 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 NFX1Q12986 1120 aaKnown RBP16.35■□□□□ 0.21
USP11-207ENST00000478596 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
USP11-207ENST00000478596 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
USP11-207ENST00000478596 TMC5Q6UXY8 1006 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 FCHSD1Q86WN1 690 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 NME8Q8N427 588 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 C6orf50Q9HD87 102 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 CA14Q9ULX7 337 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 PCDHGA2Q9Y5H1 932 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 DENND4AQ7Z401 1863 aa16.35■□□□□ 0.21
USP11-207ENST00000478596 POTEMA6NI47 508 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 SRFP11831 508 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 INSRRP14616 1297 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 EPCAMP16422 314 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 PBX3P40426 434 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 IGBP1P78318 339 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 KRT76Q01546 638 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 BMS1Q14692 1282 aaKnown RBP16.34■□□□□ 0.21
USP11-207ENST00000478596 PPM1JQ5JR12 505 aa16.34■□□□□ 0.21
USP11-207ENST00000478596 POTEGQ6S5H5 508 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms