RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RTN4RL1Q86UN2 441 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 BCL6BQ8N143 479 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 RABGGTAQ92696 567 aa5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 PARPBPQ9NWS1 579 aa5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 DENND2AQ9ULE3 1009 aa5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 MAPRE3Q9UPY8 281 aa5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 VWA7Q9Y334 891 aa5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 SH3BP1Q9Y3L3 701 aa5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 CTDP1Q9Y5B0 961 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-212ENST00000478573 PEG3Q9GZU2 1588 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 A0A087X1B8 175 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 MYCLP1P12525 358 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 SDSP20132 328 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 POU3F2P20265 443 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 MAKP20794 623 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 DPTQ07507 201 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 RRP1BQ14684 758 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 FNDC7Q5VTL7 733 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 SPTY2D1Q68D10 685 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 CC2D1AQ6P1N0 951 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 RNF180Q86T96 592 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 LRRTM3Q86VH5 581 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 TMPRSS6Q8IU80 811 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 ANKRD53Q8N9V6 530 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 OR5AN1Q8NGI8 311 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 CHAC2Q8WUX2 184 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 FOXRED1Q96CU9 486 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 SLC7A6OSQ96CW6 309 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 CLIP3Q96DZ5 547 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 FOXB1Q99853 325 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 PCIF1Q9H4Z3 704 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 CAAP1Q9H8G2 361 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 SLC2A4RGQ9NR83 387 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 CECR2Q9BXF3 1484 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 HMGXB3Q12766 1538 aa5.64□□□□□ -1.51
CDC42BPA-212ENST00000478573 SMARCA2P51531 1590 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 FAM83GA6ND36 823 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 M0R2C6 588 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 PDE8AO60658 829 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 NPTXRO95502 500 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 PRLP01236 227 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 ASLP04424 464 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 ZBTB48P10074 688 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 KCNA6P17658 529 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 SOX5P35711 763 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 INHBCP55103 352 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 SESN2P58004 480 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 INHBEP58166 350 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 BPIFB4P59827 614 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 ANAPC15P60006 121 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 ROM1Q03395 351 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 TCIRG1Q13488 830 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 CNGB1Q14028 1251 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 SMN1Q16637 294 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 GAREM2Q75VX8 874 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 DDX53Q86TM3 631 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 PPM1KQ8N3J5 372 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 AMER2Q8N7J2 671 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 LARP4BQ92615 738 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 LPPQ93052 612 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 GFM2Q969S9 779 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 E2F7Q96AV8 911 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 MPHOSPH9Q99550 1183 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 TARS2Q9BW92 718 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 SLC6A15Q9H2J7 730 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 CEP72Q9P209 647 aa5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 BAZ1AQ9NRL2 1556 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-212ENST00000478573 UBA6A0AVT1 1052 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 PMS2P1A4D2B8 440 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 C2orf78A6NCI8 922 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 RPS6KA4O75676 772 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 ADCY7P51828 1080 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 DGKDQ16760 1214 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 PRAMEF9Q5VWM5 478 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 KRT40Q6A162 431 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 SLFN12LQ6IEE8 588 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 Q6ZRM9 215 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 RPUSD2Q8IZ73 545 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 ANKRD35Q8N283 1001 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 ZNF703Q9H7S9 590 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 SAMD15Q9P1V8 674 aa5.62□□□□□ -1.51
CDC42BPA-212ENST00000478573 B4E1Z4 1266 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 MAFO75444 373 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 GLRX3O76003 335 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 POU3F3P20264 500 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 IGFALSP35858 605 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 FNTBP49356 437 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 SCNN1GP51170 649 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 ANTXR2P58335 489 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 ELAVL1Q15717 326 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 OTOP1Q7RTM1 612 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 GSPT2Q8IYD1 628 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 CHST14Q8NCH0 376 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 MIEF2Q96C03 454 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 TUBGCP5Q96RT8 1024 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 GPHA2Q96T91 129 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 NCDNQ9UBB6 729 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 RCAN3Q9UKA8 241 aa5.61□□□□□ -1.51
CDC42BPA-212ENST00000478573 TNPO3Q9Y5L0 923 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms