RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ELAC2Q9BQ52 826 aaKnown RBP16.1■□□□□ 0.17
U2AF1-210ENST00000478282 ERVK-5Q9HDB9 667 aa16.1■□□□□ 0.17
U2AF1-210ENST00000478282 GCNT4Q9P109 453 aa16.1■□□□□ 0.17
U2AF1-210ENST00000478282 TRPC6Q9Y210 931 aa16.1■□□□□ 0.17
U2AF1-210ENST00000478282 CCDC189A1A4V9 331 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SLC26A4O43511 780 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 RTN2O75298 545 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 AGTP01019 485 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 CLTAP09496 248 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 PPATQ06203 517 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 KIAA1755Q5JYT7 1200 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 MAB21L3Q8N8X9 362 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SLC30A5Q8TAD4 765 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 OLIG1Q8TAK6 271 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SLC35G2Q8TBE7 412 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 CCHCR1Q8TD31 782 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 AKAP3O75969 853 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 PAX7P23759 505 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 COPB2P35606 906 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 DRG2P55039 364 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 PLTPP55058 493 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 IFI35P80217 286 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SF3A3Q12874 501 aaKnown RBP eCLIP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 PLS1Q14651 629 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 NAA25Q14CX7 972 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 TCERG1LQ5VWI1 586 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 GJB7Q6PEY0 223 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 TBC1D1Q86TI0 1168 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 PNMA8AQ86V59 439 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 JAMLQ86YT9 394 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 GLG1Q92896 1179 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 PRMT1Q99873 361 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 NSRP1Q9H0G5 558 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 DHX36Q9H2U1 1008 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 KIAA0391O15091 583 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 TMEM253P0C7T8 217 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 HOXD13P35453 343 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 ADCY2Q08462 1091 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SLC29A2Q14542 456 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 FAM133BQ5BKY9 247 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 C6orf118Q5T5N4 469 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 ADAT2Q7Z6V5 191 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 CROCCP2Q86T23 111 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
U2AF1-210ENST00000478282 SNX24Q9Y343 169 aa16.09■□□□□ 0.17
U2AF1-210ENST00000478282 RPTORQ8N122 1335 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 SMIM23A6NLE4 172 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 VIMP08670 466 aaKnown RBP16.08■□□□□ 0.17
U2AF1-210ENST00000478282 IL1R1P14778 569 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 STAT1P42224 750 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 MYO1EQ12965 1108 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 EP400NLQ6ZTU2 488 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 EPM2AIP1Q7L775 607 aaPredicted RBP16.08■□□□□ 0.17
U2AF1-210ENST00000478282 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 TTLL6Q8N841 843 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 SLC35C1Q96A29 364 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 CNOT7Q9UIV1 285 aaKnown RBP16.08■□□□□ 0.17
U2AF1-210ENST00000478282 RASAL2Q9UJF2 1139 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 GGA1Q9UJY5 639 aa16.08■□□□□ 0.17
U2AF1-210ENST00000478282 PDXKO00764 312 aa16.08■□□□□ 0.16
U2AF1-210ENST00000478282 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.16
U2AF1-210ENST00000478282 MAPK7Q13164 816 aa16.08■□□□□ 0.16
U2AF1-210ENST00000478282 ZNF268Q14587 947 aaPredicted RBP16.08■□□□□ 0.16
U2AF1-210ENST00000478282 NSMCE1Q8WV22 266 aa16.08■□□□□ 0.16
U2AF1-210ENST00000478282 ABCF3Q9NUQ8 709 aa16.08■□□□□ 0.16
U2AF1-210ENST00000478282 IGSF9BQ9UPX0 1349 aa16.08■□□□□ 0.16
U2AF1-210ENST00000478282 PNMA6FA0A0J9YX94 578 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
U2AF1-210ENST00000478282 EVI5O60447 810 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 MED24O75448 989 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 LMNB1P20700 586 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 BTDP43251 543 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 CLUL1Q15846 466 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 TMEM109Q9BVC6 243 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 TRIM6Q9C030 488 aaPredicted RBP16.07■□□□□ 0.16
U2AF1-210ENST00000478282 KCNMB3Q9NPA1 279 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.07■□□□□ 0.16
U2AF1-210ENST00000478282 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 AGAP1Q9UPQ3 857 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 C15orf41Q9Y2V0 281 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 SLC16A3O15427 465 aaKnown RBP16.07■□□□□ 0.16
U2AF1-210ENST00000478282 PPP1R11O60927 126 aaPredicted RBP16.07■□□□□ 0.16
U2AF1-210ENST00000478282 SFR1Q86XK3 245 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 GLYCTKQ8IVS8 523 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
U2AF1-210ENST00000478282 UIMC1Q96RL1 719 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
U2AF1-210ENST00000478282 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 GRHL1Q9NZI5 618 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 POTEFA5A3E0 1075 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 NR3C1P04150 777 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 SNHG28P0DPA3 235 aa16.07■□□□□ 0.16
U2AF1-210ENST00000478282 GIT2Q14161 759 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms