RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 LONRF3Q496Y0 759 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 ZNF410Q86VK4 478 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 RHPN2Q8IUC4 686 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 TPH2Q8IWU9 490 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 CMTR2Q8IYT2 770 aaKnown RBP15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 RNF169Q8NCN4 708 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 CEP170P1Q96L14 293 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 NLRP4Q96MN2 994 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 EIF2AK1Q9BQI3 630 aaKnown RBP15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 TUFT1Q9NNX1 390 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 XPNPEP1Q9NQW7 623 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 ANKEF1Q9NU02 776 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 DAXXQ9UER7 740 aaPredicted RBP15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 LRFN2Q9ULH4 789 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 MUC3AQ02505 3323 aa15.42■□□□□ 0.06
SOX2-OT-208ENST00000477928 ASAP2O43150 1006 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 STAG3L1P0CL83 205 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 ATF7P17544 494 aaPredicted RBP15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 IRS1P35568 1242 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 PRPHP41219 470 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 FAM189BP81408 668 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 PDIA5Q14554 519 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 ZNF174Q15697 407 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 HAUS3Q68CZ6 603 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 SLC24A5Q71RS6 500 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 KLHL23Q8NBE8 558 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 TCP11Q8WWU5 503 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 RSPH1Q8WYR4 309 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 HLA-CQ95604 372 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 POLR3CQ9BUI4 534 aaPredicted RBP15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 DHX33Q9H6R0 707 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 MINDY3Q9H8M7 445 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 LMCD1Q9NZU5 365 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 RWDD3Q9Y3V2 267 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 PCDHB7Q9Y5E2 793 aa15.41■□□□□ 0.06
SOX2-OT-208ENST00000477928 MEIS3P2A8K0S8 358 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 PDIA4P13667 645 aaKnown RBP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 EMC2Q15006 297 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 PCBP1Q15365 356 aaKnown RBP eCLIP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 XKR9Q5GH70 373 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 CLLU1OSQ5K130 101 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 LRRC55Q6ZSA7 311 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 ECHDC2Q86YB7 292 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 KCTD17Q8N5Z5 321 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 PIGOQ8TEQ8 1089 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 PRPF31Q8WWY3 499 aaKnown RBP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 GCOM2Q9BZD3 368 aaPredicted RBP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 ELAC1Q9H777 363 aaKnown RBP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 UBE2ZQ9H832 354 aaPredicted RBP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 TYW1Q9NV66 732 aaKnown RBP15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 PLAGL2Q9UPG8 496 aa15.4■□□□□ 0.06
SOX2-OT-208ENST00000477928 H3BQ06 376 aaPredicted RBP15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 DGAT1O75907 488 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 KCNA5P22460 613 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 RPA1P27694 616 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 ADGRD2Q7Z7M1 963 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 SPPL3Q8TCT6 385 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 LPPQ93052 612 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 SNX21Q969T3 373 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 CASD1Q96PB1 797 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 C11orf84Q9BUA3 381 aaPredicted RBP15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 CWH43Q9H720 699 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 IFT122Q9HBG6 1241 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 CHST12Q9NRB3 414 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 TMEM161AQ9NX61 479 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 COL4A3BPQ9Y5P4 624 aa15.39■□□□□ 0.05
SOX2-OT-208ENST00000477928 BDP1A6H8Y1 2624 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 RALGAPA2Q2PPJ7 1873 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 LINC01565O15544 149 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 MED24O75448 989 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 BMP15O95972 392 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 SRGAP2CP0DJJ0 459 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 SPATA31C1P0DKV0 1188 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 ZSCAN20P17040 1043 aaPredicted RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 SFPQP23246 707 aaKnown RBP eCLIP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 TOB1P50616 345 aaPredicted RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 POU5F1BQ06416 359 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 LAMTOR4Q0VGL1 99 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 HYAL1Q12794 435 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 MXD4Q14582 209 aaPredicted RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 PTPROQ16827 1216 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 EP400NLQ6ZTU2 488 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 BRAPQ7Z569 592 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 ZNF598Q86UK7 904 aaKnown RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 C4orf32Q8N8J7 132 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 HELQQ8TDG4 1101 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 ASAP3Q8TDY4 903 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 PSPC1Q8WXF1 523 aaKnown RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 NACC1Q96RE7 527 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 UHRF1Q96T88 793 aaPredicted RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 MTRQ99707 1265 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 ATP6V0A4Q9HBG4 840 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 DACT1Q9NYF0 836 aa15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 DBR1Q9UK59 544 aaKnown RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 PIN4Q9Y237 131 aaKnown RBP15.38■□□□□ 0.05
SOX2-OT-208ENST00000477928 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms