RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MMP19Q99542 508 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 NIFKQ9BYG3 293 aaKnown RBP8.69□□□□□ -1.02
VMA21-203ENST00000477649 FGFBP2Q9BYJ0 223 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ATP6V0A4Q9HBG4 840 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 KIAA1586Q9HCI6 787 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 ZCCHC17Q9NP64 241 aaKnown RBP8.69□□□□□ -1.02
VMA21-203ENST00000477649 AGPAT5Q9NUQ2 364 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 AIPL1Q9NZN9 384 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 PKD2L1Q9P0L9 805 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 GABBR1Q9UBS5 961 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 DNAI1Q9UI46 699 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 FZD1Q9UP38 647 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 MAFBQ9Y5Q3 323 aaPredicted RBP8.69□□□□□ -1.02
VMA21-203ENST00000477649 ATP8B3O60423 1300 aa8.69□□□□□ -1.02
VMA21-203ENST00000477649 SMCHD1A6NHR9 2005 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 RASSF10A6NK89 507 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 RIOK3O14730 519 aaKnown RBP8.68□□□□□ -1.02
VMA21-203ENST00000477649 BACH1O14867 736 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 EXOC3O60645 756 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 CNMDO75829 334 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 SLU7O95391 586 aaKnown RBP8.68□□□□□ -1.02
VMA21-203ENST00000477649 SERPING1P05155 500 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 ERVK-9P63128 1117 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 GOLGA8FQ08AF8 430 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 GOLGA8DPQ0D2H9 430 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 KCNMA1Q12791 1236 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 BRDTQ58F21 947 aaPredicted RBP8.68□□□□□ -1.02
VMA21-203ENST00000477649 SFMBT2Q5VUG0 894 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 GPAT2Q6NUI2 795 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 SWSAP1Q6NVH7 229 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 WDR59Q6PJI9 974 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 ANO5Q75V66 913 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 VPS36Q86VN1 386 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 MAP4K3Q8IVH8 894 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 C2orf69Q8N8R5 385 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 XXYLT1Q8NBI6 393 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 UBE2Q2Q8WVN8 375 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 SEPT1Q8WYJ6 367 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 BAP1Q92560 729 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 SLC35C1Q96A29 364 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 CLMNQ96JQ2 1002 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 FAM81BQ96LP2 452 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 DEF6Q9H4E7 631 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 NHEJ1Q9H9Q4 299 aaPredicted RBP8.68□□□□□ -1.02
VMA21-203ENST00000477649 KMT5AQ9NQR1 393 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 ZNF302Q9NR11 478 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 PDLIM7Q9NR12 457 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 CYP26B1Q9NR63 512 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 FAM207AQ9NSI2 230 aaPredicted RBP8.68□□□□□ -1.02
VMA21-203ENST00000477649 RBPJLQ9UBG7 517 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 MORF4L1Q9UBU8 362 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 ZMYM2Q9UBW7 1377 aa8.68□□□□□ -1.02
VMA21-203ENST00000477649 SOWAHBA6NEL2 793 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 RBAK-RBAKDNI3L0D1 243 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 ZBTB39O15060 712 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 STBD1O95210 358 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 OATP04181 439 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 PTPRFP10586 1907 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 GARTP22102 1010 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 GTF2H1P32780 548 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 VAV2P52735 878 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 PEX3P56589 373 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 PRKCEQ02156 737 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 KIF5AQ12840 1032 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 PDAP1Q13442 181 aaKnown RBP8.67□□□□□ -1.02
VMA21-203ENST00000477649 UGCGQ16739 394 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 PTPN21Q16825 1174 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 FAM102BQ5T8I3 360 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 SLFN12LQ6IEE8 588 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 RRAGAQ7L523 313 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 PLPPR4Q7Z2D5 763 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 KIAA1328Q86T90 577 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 MSL3Q8N5Y2 521 aaKnown RBP8.67□□□□□ -1.02
VMA21-203ENST00000477649 TMEM161BQ8NDZ6 487 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 TCP11Q8WWU5 503 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 SLC7A3Q8WY07 619 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 EEF2KMTQ96G04 330 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 ZFP91Q96JP5 570 aaPredicted RBP8.67□□□□□ -1.02
VMA21-203ENST00000477649 SYNGAP1Q96PV0 1343 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 PAGR1Q9BTK6 254 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 LSM14BQ9BX40 385 aaKnown RBP8.67□□□□□ -1.02
VMA21-203ENST00000477649 AZI2Q9H6S1 392 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 OTOFQ9HC10 1997 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 GBA2Q9HCG7 927 aaPredicted RBP8.67□□□□□ -1.02
VMA21-203ENST00000477649 SEPT9Q9UHD8 586 aaPredicted RBP8.67□□□□□ -1.02
VMA21-203ENST00000477649 TBX20Q9UMR3 447 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 USP20Q9Y2K6 914 aa8.67□□□□□ -1.02
VMA21-203ENST00000477649 DIS3Q9Y2L1 958 aaKnown RBP8.67□□□□□ -1.02
VMA21-203ENST00000477649 COL11A1P12107 1806 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 EMSYQ7Z589 1322 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 ANO9A1A5B4 782 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 CTAGE9A4FU28 777 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 LRRC53A6NM62 1247 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 RNF225M0QZC1 329 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 AKR1B10O60218 316 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 ZNF862O60290 1169 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 LGR5O75473 907 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 FARP2O94887 1054 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 HOXC6P09630 235 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms