RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-220ENST00000477528 RHBDL3P58872 404 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 IGBP1P78318 339 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 Q4G0T1 1027 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 VSIG1Q86XK7 387 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.74■□□□□ 0.11
HDAC6-220ENST00000477528 ANAPC7Q9UJX3 599 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-220ENST00000477528 KRT81Q14533 505 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 ZC2HC1CQ53FD0 456 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-220ENST00000477528 PAPD7Q5XG87 772 aaKnown RBP15.74■□□□□ 0.11
HDAC6-220ENST00000477528 ARMC9Q7Z3E5 817 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 SAAL1Q96ER3 474 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 MS4A14Q96JA4 679 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 SNX24Q9Y343 169 aa15.74■□□□□ 0.11
HDAC6-220ENST00000477528 BCL9LQ86UU0 1499 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 EVI5O60447 810 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 SF3A3Q12874 501 aaKnown RBP eCLIP15.73■□□□□ 0.112e-7■■■□□ 18
HDAC6-220ENST00000477528 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-220ENST00000477528 RSRC2Q7L4I2 434 aaKnown RBP15.73■□□□□ 0.11
HDAC6-220ENST00000477528 ENOSF1Q7L5Y1 443 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 ZBTB33Q86T24 672 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 ZNF564Q8TBZ8 553 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-220ENST00000477528 DDX4Q9NQI0 724 aaKnown RBP15.73■□□□□ 0.11
HDAC6-220ENST00000477528 HESX1Q9UBX0 185 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 GALCP54803 685 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 EFCAB13Q8IY85 973 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 CCHCR1Q8TD31 782 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 TNFRSF25Q93038 417 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 SMC6Q96SB8 1091 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 KRT1P04264 644 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 PLS3P13797 630 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-220ENST00000477528 RINT1Q6NUQ1 792 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 FBXL13Q8NEE6 735 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 ACAD9Q9H845 621 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 HSPBP1Q9NZL4 362 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 RGPD2P0DJD1 1756 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 KLRC1P26715 233 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 TMEM119Q4V9L6 283 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 PPP1R21Q6ZMI0 780 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 EEPD1Q7L9B9 569 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 PHLDB2Q86SQ0 1253 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 PRMT6Q96LA8 375 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-220ENST00000477528 LACRTQ9GZZ8 138 aa15.73■□□□□ 0.11
HDAC6-220ENST00000477528 OSBPP22059 807 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 CHRNA3P32297 505 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 PNKPQ96T60 521 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 NUP85Q9BW27 656 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 ADAM22Q9P0K1 906 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 FAM187AA6NFU0 413 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 RASGRF2O14827 1237 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 DAPK3O43293 454 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 MED7O43513 233 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 ZNF211Q13398 564 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-220ENST00000477528 GIT2Q14161 759 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 WDR93Q6P2C0 686 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 SCYL2Q6P3W7 929 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
HDAC6-220ENST00000477528 GPD1LQ8N335 351 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 FAM167AQ96KS9 214 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 MTRQ99707 1265 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 RUSC1Q9BVN2 902 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 RBM12Q9NTZ6 932 aaKnown RBP15.72■□□□□ 0.11
HDAC6-220ENST00000477528 KLHL14Q9P2G3 628 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 TCHHQ07283 1943 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 CYP2C19P33261 490 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 EVX2Q03828 476 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 EN1Q05925 392 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-220ENST00000477528 ITIH3Q06033 890 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 ADCY2Q08462 1091 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 IL17AQ16552 155 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 C6orf118Q5T5N4 469 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 WNT8AQ9H1J5 351 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 ZNF302Q9NR11 478 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 BLOC1S4Q9NUP1 217 aa15.72■□□□□ 0.11
HDAC6-220ENST00000477528 CTNND1O60716 968 aaKnown RBP15.71■□□□□ 0.11
HDAC6-220ENST00000477528 PRLRP16471 622 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 CD58P19256 250 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 CCNA1P78396 465 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 PDCLQ13371 301 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 MTMR2Q13614 643 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 SCFD1Q8WVM8 642 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 FUT8Q9BYC5 575 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 SLC5A4Q9NY91 659 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-220ENST00000477528 MUTP22033 750 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 DDR1Q08345 913 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 IFT88Q13099 833 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 PNMA8AQ86V59 439 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-220ENST00000477528 CCDC197Q8NCU1 140 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 TMEM39BQ9GZU3 492 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 POLR3FQ9H1D9 316 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-220ENST00000477528 DUSP10Q9Y6W6 482 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 CLDN3O15551 220 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 SRGAP2CP0DJJ0 459 aa15.71■□□□□ 0.11
HDAC6-220ENST00000477528 BEND6Q5SZJ8 279 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms