RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 PSMC5P62195 406 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 CDC42EP1Q00587 391 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 KRT17Q04695 432 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 INF2Q27J81 1249 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 ZNF410Q86VK4 478 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 SLC39A11Q8N1S5 342 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 HELQQ8TDG4 1101 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 FDXACB1Q9BRP7 624 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-236ENST00000477477 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
HDLBP-236ENST00000477477 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.37
HDLBP-236ENST00000477477 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 SPG21Q9NZD8 308 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 KCNJ14Q9UNX9 436 aa12.77□□□□□ -0.37
HDLBP-236ENST00000477477 DDX11L8A8MPP1 907 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 MAFO75444 373 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-236ENST00000477477 CDKL5O76039 1030 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDLBP-236ENST00000477477 PHKA2P46019 1235 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 DNM2P50570 870 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 SCRN1Q12765 414 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 LETM2Q2VYF4 491 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 ANKRD54Q6NXT1 300 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 ANO5Q75V66 913 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 RSPH1Q8WYR4 309 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 EDAQ92838 391 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 PHF20Q9BVI0 1012 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 TRAIPQ9BWF2 469 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 S1PR5Q9H228 398 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 SUCLA2Q9P2R7 463 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-236ENST00000477477 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
HDLBP-236ENST00000477477 TRIOO75962 3097 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 CCDC194A0A1B0GVG4 234 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 EML1O00423 815 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 GCFC2P16383 781 aaKnown RBP12.75□□□□□ -0.37
HDLBP-236ENST00000477477 TECP42680 631 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 QARSP47897 775 aaKnown RBP12.75□□□□□ -0.37
HDLBP-236ENST00000477477 PPP2R5CQ13362 524 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 SYCE2Q6PIF2 218 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 TMC7Q7Z402 723 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 RHPN2Q8IUC4 686 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 PIEZO1Q92508 2521 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 RPGRIP1Q96KN7 1286 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 MFSD14AQ96MC6 490 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 NLRP4Q96MN2 994 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 JPH2Q9BR39 696 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-236ENST00000477477 INO80BQ9C086 356 aaPredicted RBP12.75□□□□□ -0.37
HDLBP-236ENST00000477477 KCNH6Q9H252 994 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 KCNMB3Q9NPA1 279 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 CYP26B1Q9NR63 512 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
HDLBP-236ENST00000477477 PIN4Q9Y237 131 aaKnown RBP12.75□□□□□ -0.37
HDLBP-236ENST00000477477 WDR81Q562E7 1941 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 C2orf71A6NGG8 1288 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 DKC1O60832 514 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDLBP-236ENST00000477477 SKIP12755 728 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-236ENST00000477477 XBP1P17861 261 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 BCAR1P56945 870 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 ZXDAP98168 799 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
HDLBP-236ENST00000477477 TWF2Q6IBS0 349 aaKnown RBP12.74□□□□□ -0.37
HDLBP-236ENST00000477477 PPP4R3AQ6IN85 833 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 TRIM67Q6ZTA4 783 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 BMP8AQ7Z5Y6 402 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 KSR1Q8IVT5 923 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 MRPL43Q8N983 215 aaKnown RBP12.74□□□□□ -0.37
HDLBP-236ENST00000477477 CASP10Q92851 521 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 FBXL18Q96ME1 805 aa12.74□□□□□ -0.37
HDLBP-236ENST00000477477 SLKQ9H2G2 1235 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-236ENST00000477477 WRAP73Q9P2S5 460 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-236ENST00000477477 TECTAO75443 2155 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 TMEM221A6NGB7 291 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 NT5C1B-RDH14C9J2C7 533 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 M0R296 226 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 TBX3O15119 743 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 PFKFB2O60825 505 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 ZC3H11AO75152 810 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDLBP-236ENST00000477477 P4HBP07237 508 aaKnown RBP12.73□□□□□ -0.37
HDLBP-236ENST00000477477 ALDH7A1P49419 539 aaKnown RBP12.73□□□□□ -0.37
HDLBP-236ENST00000477477 RAB27AP51159 221 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 NPEPPSP55786 919 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 GLB1LQ6UWU2 654 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 CATSPER4Q7RTX7 472 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 TMEM173Q86WV6 379 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-236ENST00000477477 SLC7A3Q8WY07 619 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 LPPQ93052 612 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 TMEM169Q96HH4 297 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 CEP170P1Q96L14 293 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
HDLBP-236ENST00000477477 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 IFT122Q9HBG6 1241 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 GJB4Q9NTQ9 266 aa12.73□□□□□ -0.37
HDLBP-236ENST00000477477 AGPAT5Q9NUQ2 364 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms