RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 WDR92Q96MX6 357 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 MPHOSPH9Q99550 1183 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 ELF4Q99607 663 aaPredicted RBP6.01□□□□□ -1.45
UBR3-209ENST00000477461 MSL2Q9HCI7 577 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 PARPBPQ9NWS1 579 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 KCMF1Q9P0J7 381 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 C11orf21Q9P2W6 132 aa6.01□□□□□ -1.45
UBR3-209ENST00000477461 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
UBR3-209ENST00000477461 CYP27B1O15528 508 aa6□□□□□ -1.45
UBR3-209ENST00000477461 MAFO75444 373 aaPredicted RBP6□□□□□ -1.45
UBR3-209ENST00000477461 TOX4O94842 621 aa6□□□□□ -1.45
UBR3-209ENST00000477461 CYP17A1P05093 508 aa6□□□□□ -1.45
UBR3-209ENST00000477461 MYBPC3Q14896 1274 aa6□□□□□ -1.45
UBR3-209ENST00000477461 ELAVL1Q15717 326 aaKnown RBP6□□□□□ -1.45
UBR3-209ENST00000477461 CFAP100Q494V2 611 aa6□□□□□ -1.45
UBR3-209ENST00000477461 UNQ6494/PRO21346Q6UXR6 183 aa6□□□□□ -1.45
UBR3-209ENST00000477461 UBE2R2Q712K3 238 aaPredicted RBP6□□□□□ -1.45
UBR3-209ENST00000477461 ELOA2Q8IYF1 753 aaPredicted RBP6□□□□□ -1.45
UBR3-209ENST00000477461 SH3TC2Q8TF17 1288 aa6□□□□□ -1.45
UBR3-209ENST00000477461 ZNF483Q8TF39 744 aaPredicted RBP6□□□□□ -1.45
UBR3-209ENST00000477461 RTF1Q92541 710 aaKnown RBP6□□□□□ -1.45
UBR3-209ENST00000477461 LPPQ93052 612 aa6□□□□□ -1.45
UBR3-209ENST00000477461 NKD2Q969F2 451 aaPredicted RBP6□□□□□ -1.45
UBR3-209ENST00000477461 PGBD4Q96DM1 585 aa6□□□□□ -1.45
UBR3-209ENST00000477461 CEP89Q96ST8 783 aa6□□□□□ -1.45
UBR3-209ENST00000477461 TCF25Q9BQ70 676 aa6□□□□□ -1.45
UBR3-209ENST00000477461 ZSWIM4Q9H7M6 989 aa6□□□□□ -1.45
UBR3-209ENST00000477461 TOMM22Q9NS69 142 aa6□□□□□ -1.45
UBR3-209ENST00000477461 H2AFY2Q9P0M6 372 aaPredicted RBP6□□□□□ -1.45
UBR3-209ENST00000477461 RSF1Q96T23 1441 aaPredicted RBP5.99□□□□□ -1.45
UBR3-209ENST00000477461 CC2D2AQ9P2K1 1620 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 SMARCA2P51531 1590 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 FAM20BO75063 409 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 ASMTLO95671 621 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 ADH4P08319 380 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 ADAM8P78325 824 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 DPTQ07507 201 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 NFE2L2Q16236 605 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 ZNF627Q7L945 461 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 ANKRD35Q8N283 1001 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 MIEF2Q96C03 454 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 MRFAP1L1Q96HT8 127 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 MYL10Q9BUA6 226 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 ZNF703Q9H7S9 590 aaPredicted RBP5.99□□□□□ -1.45
UBR3-209ENST00000477461 IL23AQ9NPF7 189 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 AURKAIP1Q9NWT8 199 aaPredicted RBP5.99□□□□□ -1.45
UBR3-209ENST00000477461 B4GALT6Q9UBX8 382 aa5.99□□□□□ -1.45
UBR3-209ENST00000477461 CBX4O00257 560 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 DAPK3O43293 454 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 PRPF6O94906 941 aaKnown RBP5.98□□□□□ -1.45
UBR3-209ENST00000477461 MAKP20794 623 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 SLC25A3Q00325 362 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 ESRP1Q6NXG1 681 aaKnown RBP5.98□□□□□ -1.45
UBR3-209ENST00000477461 CLEC14AQ86T13 490 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 NXPE1Q8N323 547 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 MB21D1Q8N884 522 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 RPGRQ92834 1020 aaKnown RBP5.98□□□□□ -1.45
UBR3-209ENST00000477461 GPR87Q9BY21 358 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 POFUT1Q9H488 388 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 POLR3BQ9NW08 1133 aaPredicted RBP5.98□□□□□ -1.45
UBR3-209ENST00000477461 WDR33Q9C0J8 1336 aaKnown RBP5.98□□□□□ -1.45
UBR3-209ENST00000477461 WIZO95785 1651 aa5.98□□□□□ -1.45
UBR3-209ENST00000477461 A0A087X1B8 175 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 STC2O76061 302 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 FLT3P36888 993 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 MAN2A2P49641 1150 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 ADCY2Q08462 1091 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 PABPC4Q13310 644 aaKnown RBP eCLIP5.97□□□□□ -1.45
UBR3-209ENST00000477461 FKBP15Q5T1M5 1219 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 ARL8AQ96BM9 186 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 IFT57Q9NWB7 429 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 OXSMQ9NWU1 459 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 XDHP47989 1333 aa5.97□□□□□ -1.45
UBR3-209ENST00000477461 KPNA6O60684 536 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 VSIG10L2P0DP72 767 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 ATP2A2P16615 1042 aaKnown RBP5.96□□□□□ -1.46
UBR3-209ENST00000477461 NEK4P51957 841 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 BCAR1P56945 870 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 EPHA7Q15375 998 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 TIGD7Q6NT04 549 aaPredicted RBP5.96□□□□□ -1.46
UBR3-209ENST00000477461 BMP8AQ7Z5Y6 402 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 C7orf31Q8N865 590 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
UBR3-209ENST00000477461 NOL10Q9BSC4 688 aaKnown RBP5.96□□□□□ -1.46
UBR3-209ENST00000477461 MTG2Q9H4K7 406 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 SYNPO2Q9UMS6 1093 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 ZKSCAN5Q9Y2L8 839 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 PEG3Q9GZU2 1588 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 ATAD2BQ9ULI0 1458 aa5.96□□□□□ -1.46
UBR3-209ENST00000477461 CCDC144BQ3MJ40 725 aa5.95□□□□□ -1.46
UBR3-209ENST00000477461 CREB3L3Q68CJ9 461 aa5.95□□□□□ -1.46
UBR3-209ENST00000477461 NME9Q86XW9 330 aa5.95□□□□□ -1.46
UBR3-209ENST00000477461 PHYKPLQ8IUZ5 450 aa5.95□□□□□ -1.46
UBR3-209ENST00000477461 ZNF512Q96ME7 567 aaPredicted RBP5.95□□□□□ -1.46
UBR3-209ENST00000477461 NRDE2Q9H7Z3 1164 aa5.95□□□□□ -1.46
UBR3-209ENST00000477461 ING3Q9NXR8 418 aa5.95□□□□□ -1.46
UBR3-209ENST00000477461 SPO11Q9Y5K1 396 aa5.95□□□□□ -1.46
UBR3-209ENST00000477461 BAZ1BQ9UIG0 1483 aaKnown RBP5.95□□□□□ -1.46
UBR3-209ENST00000477461 ZNF891A8MT65 544 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms