RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 C10orf76Q5T2E6 689 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 ANKS1AQ92625 1134 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 HAS1Q92839 578 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 VTI1AQ96AJ9 217 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 TRIM51Q9BSJ1 452 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 IKZF4Q9H2S9 585 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 SERPINA10Q9UK55 444 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 KIF1AQ12756 1690 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 TOPAZ1Q8N9V7 1692 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 ENTPD3O75355 529 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 ACOT2P49753 483 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 EDRF1Q3B7T1 1238 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 KLHDC7AQ5VTJ3 777 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 TMEM270Q6UE05 265 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 RSRC2Q7L4I2 434 aaKnown RBP11.88□□□□□ -0.51
COL27A1-204ENST00000477421 ZBTB8OSQ8IWT0 167 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 SLC35G2Q8TBE7 412 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 PPM1EQ8WY54 764 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 APOL6Q9BWW8 343 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 PLCB1Q9NQ66 1216 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 MYO1CO00159 1063 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 EML1O00423 815 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 NFIBO00712 420 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
COL27A1-204ENST00000477421 GUCY1A3Q02108 690 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 PPP2R5DQ14738 602 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 RSBN1LQ6PCB5 846 aaPredicted RBP11.88□□□□□ -0.51
COL27A1-204ENST00000477421 C4orf32Q8N8J7 132 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 CCDC89Q8N998 374 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.88□□□□□ -0.51
COL27A1-204ENST00000477421 PI4K2AQ9BTU6 479 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 MSTO1Q9BUK6 570 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 ADAM33Q9BZ11 813 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 EDEM3Q9BZQ6 932 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 AFDNP55196 1824 aaKnown RBP11.88□□□□□ -0.51
COL27A1-204ENST00000477421 ATF2P15336 505 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 STX2P32856 288 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 CYP2C19P33261 490 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 CTAGE3PQ8IX95 158 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 CACNA2D3Q8IZS8 1091 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 FAM151AQ8WW52 585 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 NRBP2Q9NSY0 501 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 RAB20Q9NX57 234 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 NAGPAQ9UK23 515 aa11.88□□□□□ -0.51
COL27A1-204ENST00000477421 PSAPP07602 524 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 MSANTD4Q8NCY6 345 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 WHAMMQ8TF30 809 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 TMEM143Q96AN5 459 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 RNPC3Q96LT9 517 aaKnown RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 MTMR9Q96QG7 549 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FAM118BQ9BPY3 351 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FAM114A2Q9NRY5 505 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 TBC1D22BQ9NU19 505 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 INTS9Q9NV88 658 aaKnown RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 ZNRF3Q9ULT6 936 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 USP20Q9Y2K6 914 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 RAD51CO43502 376 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FGRP09769 529 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 DPEP1P16444 411 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 PON1P27169 355 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 GPC5P78333 572 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 ALS2CLQ60I27 953 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 TAOK1Q7L7X3 1001 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 SESTD1Q86VW0 696 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FBF1Q8TES7 1133 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 TAAR1Q96RJ0 339 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.87□□□□□ -0.512e-38■■□□□ 11.4
COL27A1-204ENST00000477421 HSPBP1Q9NZL4 362 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FEZ2Q9UHY8 353 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 FBXL5Q9UKA1 691 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 LRRD1A4D1F6 860 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 ECEL1O95672 775 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 SOX10P56693 466 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 BFSP1Q12934 665 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 ECM1Q16610 540 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 GKAP1Q5VSY0 366 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 MIS18BP1Q6P0N0 1132 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 C1orf54Q8WWF1 131 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 CBWD1Q9BRT8 395 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 NUP85Q9BW27 656 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 SEL1LQ9UBV2 794 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 APEX2Q9UBZ4 518 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 BAIAP2L1Q9UHR4 511 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
COL27A1-204ENST00000477421 HPCAL4Q9UM19 191 aa11.87□□□□□ -0.51
COL27A1-204ENST00000477421 SYNJ2BP-COX16A0A087WUM0 186 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 A0A1W2PQJ5 194 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PDE2AO00408 941 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 TRIM66O15016 1216 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 TBX3O15119 743 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 KCNJ1P48048 391 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 YARSP54577 528 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms